RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 FAM215AQ9Y5M1 114 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 C5orf63A6NC05 138 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 UBE2E1P51965 193 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 NMUP48645 174 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 PEF1Q9UBV8 284 aaKnown RBP8.79□□□□□ -1
SYNPO2-201ENST00000307142 OR11H12B2RN74 326 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 F8VVB4 439 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 F8VWA3 439 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 RPL15P61313 204 aaKnown RBP8.79□□□□□ -1
SYNPO2-201ENST00000307142 PRCDQ00LT1 54 aa8.79□□□□□ -1
SYNPO2-201ENST00000307142 DMRTC2Q8IXT2 367 aaPredicted RBP8.79□□□□□ -1
SYNPO2-201ENST00000307142 FAM223BA6NKX1 122 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 H0YJW9 148 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 PEX7O00628 323 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 HOXA3O43365 443 aaPredicted RBP8.78□□□□□ -1
SYNPO2-201ENST00000307142 PRB4P10163 310 aaPredicted RBP8.78□□□□□ -1
SYNPO2-201ENST00000307142 FAM223AQ8IWN6 122 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 PRTN3P24158 256 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 FAM3BP58499 235 aaPredicted RBP8.78□□□□□ -1
SYNPO2-201ENST00000307142 SHISA3A0PJX4 238 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 NAT1P18440 290 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 C10orf55Q5SWW7 151 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 C7orf77A4D0Y5 90 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 MPTX1A8MV57 137 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 H2BFSP57053 126 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 CD300CQ08708 224 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 LAIR2Q6ISS4 152 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 PRDM13Q9H4Q3 707 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 PSCAO43653 123 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 CD55P08174 381 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 SLX1AQ9BQ83 275 aa8.78□□□□□ -1
SYNPO2-201ENST00000307142 KLF2Q9Y5W3 355 aaPredicted RBP8.78□□□□□ -1
SYNPO2-201ENST00000307142 CIRBPQ14011 172 aaKnown RBP8.77□□□□□ -1
SYNPO2-201ENST00000307142 KLF17Q5JT82 389 aaPredicted RBP8.77□□□□□ -1
SYNPO2-201ENST00000307142 GRIFINA4D1Z8 144 aa8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 CD8AP01732 235 aa8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 RIPPLY3P57055 190 aa8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 KCNS1Q96KK3 526 aa8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 ZFP30Q9Y2G7 519 aa8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 SYNJ2BPP57105 145 aa8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 C18orf12Q96KH6 178 aa8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 ZNF688P0C7X2 276 aa8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 LGALS3P17931 250 aaKnown RBP8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 SPSB3Q6PJ21 355 aa8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 ALKBH7Q9BT30 221 aaPredicted RBP8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 ZFHX2Q9C0A1 2572 aaPredicted RBP8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 H7C2G1 150 aa8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 TMEM144Q7Z5S9 345 aa8.77□□□□□ -1.01
SYNPO2-201ENST00000307142 J3QRE1 110 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 LYRM7Q5U5X0 104 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 TMEM42Q69YG0 159 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 ASCL4Q6XD76 172 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 UBE2E2Q96LR5 201 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 OTORQ9NRC9 128 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 CD5P06127 495 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 FBLN7Q53RD9 439 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 CHAC2Q8WUX2 184 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 MRAPQ8TCY5 172 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 SFRP2Q96HF1 295 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 OR1P1Q8NH06 330 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 RNF5Q99942 180 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 SMDT1Q9H4I9 107 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 LINC01619G3V211 115 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 MDKP21741 143 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 CFHR2P36980 270 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 Q6P435 159 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 NRGNQ92686 78 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 GNG5P63218 68 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 REC114Q7Z4M0 266 aa8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 PSMG3Q9BT73 122 aaPredicted RBP8.76□□□□□ -1.01
SYNPO2-201ENST00000307142 TRAV21A0A0B4J279 112 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 EFNB3Q15768 340 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 PARLQ9H300 379 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 ZNF256Q9Y2P7 627 aaPredicted RBP8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 TRGV11A0A075B6L2 103 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 LCN12Q6JVE5 192 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 CACNA1HO95180 2353 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 SCO2A0A1W2PP80 73 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 FHITP49789 147 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 SIGLEC9Q9Y336 463 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 H3BVH4 76 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 TOMM7Q9P0U1 55 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 SOD3P08294 240 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 BEND2Q8NDZ0 799 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 RAB37Q96AX2 223 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 TRAF4Q9BUZ4 470 aaPredicted RBP8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 MRPL18Q9H0U6 180 aaKnown RBP8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 OVOL1O14753 267 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 AGAP20933 346 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 PRADC1Q9BSG0 188 aa8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 ZNF106Q9H2Y7 1883 aaKnown RBP8.75□□□□□ -1.01
SYNPO2-201ENST00000307142 FAM90A9PA6NNJ1 464 aa8.74□□□□□ -1.01
SYNPO2-201ENST00000307142 OR4D5Q8NGN0 318 aa8.74□□□□□ -1.01
SYNPO2-201ENST00000307142 ZNRD1Q9P1U0 126 aa8.74□□□□□ -1.01
SYNPO2-201ENST00000307142 COL4A3Q01955 1670 aa8.74□□□□□ -1.01
SYNPO2-201ENST00000307142 FCN3O75636 299 aa8.74□□□□□ -1.01
SYNPO2-201ENST00000307142 CFAP161Q6P656 301 aa8.74□□□□□ -1.01
SYNPO2-201ENST00000307142 FER1L6-AS1Q8NA97 138 aa8.74□□□□□ -1.01
SYNPO2-201ENST00000307142 MRAP2Q96G30 205 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms