RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 RAB1CQ92928 201 aa15.39■□□□□ 0.05
COL4A3BP-201ENST00000261415 QTRT1Q9BXR0 403 aaKnown RBP15.39■□□□□ 0.05
COL4A3BP-201ENST00000261415 SLC25A10Q9UBX3 287 aaPredicted RBP15.39■□□□□ 0.05
COL4A3BP-201ENST00000261415 OR51B2Q9Y5P1 312 aa15.39■□□□□ 0.05
COL4A3BP-201ENST00000261415 UBE2L5PA0A1B0GUS4 154 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 FCN3O75636 299 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 IGHV4-39P01824 125 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 WFDC12Q8WWY7 111 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 ST20Q9HBF5 79 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 PSG11Q9UQ72 335 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 PTPN13Q12923 2485 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 NUDT3O95989 172 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 HTD2P86397 168 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 TMEM249Q2WGJ8 235 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 OR13A1Q8NGR1 328 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 NINJ1Q92982 152 aa15.38■□□□□ 0.05
COL4A3BP-201ENST00000261415 IGKV1-6A0A0C4DH72 117 aa15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 GAGE10A6NGK3 116 aa15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 SLC38A11Q08AI6 406 aa15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 DCTN5Q9BTE1 182 aa15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 NAT8BQ9UHF3 227 aa15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 NDUFB3O43676 98 aa15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 LINC00869P0C866 280 aa15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 RPEL1Q2QD12 228 aa15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 ZNF114Q8NC26 417 aa15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 FAM216AQ8WUB2 273 aa15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 ASH1LQ9NR48 2969 aaKnown RBP15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 KCNIP1Q9NZI2 227 aa15.37■□□□□ 0.05
COL4A3BP-201ENST00000261415 ABCA12Q86UK0 2595 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 C12orf77C9JDV5 145 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 TMEM155Q4W5P6 130 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 OR1B1Q8NGR6 318 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 UBALD1Q8TB05 177 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 TSKUQ8WUA8 353 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 CSMD2Q7Z408 3487 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 MT-CO2P00403 227 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 IAPPP10997 89 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 IL1F10Q8WWZ1 152 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 LSM10Q969L4 123 aaKnown RBP15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 RCHY1Q96PM5 261 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 MALRD1Q5VYJ5 2156 aa15.36■□□□□ 0.05
COL4A3BP-201ENST00000261415 NBPF19A0A087WUL8 3843 aa15.35■□□□□ 0.05
COL4A3BP-201ENST00000261415 SMIM17P0DL12 118 aa15.35■□□□□ 0.05
COL4A3BP-201ENST00000261415 SSTR5P35346 364 aa15.35■□□□□ 0.05
COL4A3BP-201ENST00000261415 GPR6P46095 362 aaPredicted RBP15.35■□□□□ 0.05
COL4A3BP-201ENST00000261415 TRAT1Q6PIZ9 186 aa15.35■□□□□ 0.05
COL4A3BP-201ENST00000261415 C5orf17Q8NAS9 161 aa15.35■□□□□ 0.05
COL4A3BP-201ENST00000261415 SERPINE2P07093 398 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 CR1LQ2VPA4 569 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 OR1N2Q8NGR9 330 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 ATP6V0BQ99437 205 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 MUC21A0A0G2JKD1 596 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 A0A0G2JRQ6 117 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 MUC21A0A140T8X8 626 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 GNG7O60262 68 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 F2RP25116 425 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 KRTAP10-9P60411 292 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 RELBQ01201 579 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 MUC21Q5SSG8 566 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 ZNF439Q8NDP4 499 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 OR1L1Q8NH94 360 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 DERL1Q9BUN8 251 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 APCP25054 2843 aa15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 FASNP49327 2511 aaKnown RBP15.34■□□□□ 0.05
COL4A3BP-201ENST00000261415 ARHGAP32A7KAX9 2087 aa15.33■□□□□ 0.05
COL4A3BP-201ENST00000261415 TRAV8-6A0A0B4J262 113 aa15.33■□□□□ 0.05
COL4A3BP-201ENST00000261415 HBZP02008 142 aa15.33■□□□□ 0.05
COL4A3BP-201ENST00000261415 PPIAL4GP0DN37 164 aa15.33■□□□□ 0.05
COL4A3BP-201ENST00000261415 ATP5J2P56134 94 aa15.33■□□□□ 0.05
COL4A3BP-201ENST00000261415 SPANXN5Q5MJ07 72 aa15.33■□□□□ 0.05
COL4A3BP-201ENST00000261415 LCN12Q6JVE5 192 aa15.33■□□□□ 0.05
COL4A3BP-201ENST00000261415 MMD2Q8IY49 270 aa15.33■□□□□ 0.05
COL4A3BP-201ENST00000261415 ZNF48Q96MX3 618 aaPredicted RBP15.33■□□□□ 0.05
COL4A3BP-201ENST00000261415 POLQO75417 2590 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 PGPEP1LA6NFU8 196 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 C15orf65H3BRN8 121 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 PGLYRP1O75594 196 aaPredicted RBP15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 NTF3P20783 257 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 HIST2H2BCQ6DN03 193 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 UFSP1Q6NVU6 142 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 SLC25A34Q6PIV7 304 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 ZNF841Q6ZN19 808 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 OR8B3Q8NGG8 313 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 OCC1Q8TAD7 63 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 GALMQ96C23 342 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 OR8B2Q96RD0 313 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 CLEC5AQ9NY25 188 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 OR1A1Q9P1Q5 309 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 LY96Q9Y6Y9 160 aa15.33■□□□□ 0.04
COL4A3BP-201ENST00000261415 TRGV10A0A0A0MS01 117 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 RPL31P62899 125 aaKnown RBP15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 MRPL54Q6P161 138 aaKnown RBP15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 OR10W1Q8NGF6 305 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 H1FXQ92522 213 aaKnown RBP15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 TMEM147Q9BVK8 224 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 VPS13CQ709C8 3753 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 NPIPB11E5RHQ5 1161 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 HLA-DQA1P01909 254 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 HLA-DRB1P01911 266 aa15.32■□□□□ 0.04
COL4A3BP-201ENST00000261415 ATP5G3P48201 142 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms