RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 LCNL1Q6ZST4 164 aa8.7□□□□□ -1.02
VCL-201ENST00000211998 RNASE8Q8TDE3 154 aaKnown RBP8.7□□□□□ -1.02
VCL-201ENST00000211998 SLC25A15Q9Y619 301 aa8.7□□□□□ -1.02
VCL-201ENST00000211998 CACNA1DQ01668 2161 aa8.7□□□□□ -1.02
VCL-201ENST00000211998 FAM159AQ6UWV7 190 aa8.7□□□□□ -1.02
VCL-201ENST00000211998 D6R8Y8 96 aa8.7□□□□□ -1.02
VCL-201ENST00000211998 Q6ZVH6 145 aa8.7□□□□□ -1.02
VCL-201ENST00000211998 M0R2P5 195 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 DNAJC13O75165 2243 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 IGHV2OR16-5A0A0B4J2B6 119 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 F8W1H4 67 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 NPFFO15130 113 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 LYPD3O95274 346 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 PLNP26678 52 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 NRN1LQ496H8 165 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 IFITM1P13164 125 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 C1orf162Q8NEQ5 155 aaPredicted RBP8.69□□□□□ -1.02
VCL-201ENST00000211998 EEF1AKMT3Q96AZ1 226 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 SEPSECSQ9HD40 501 aaKnown RBP8.69□□□□□ -1.02
VCL-201ENST00000211998 TMEM74BQ9NUR3 256 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 LY96Q9Y6Y9 160 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 RBBP6Q7Z6E9 1792 aaKnown RBP8.69□□□□□ -1.02
VCL-201ENST00000211998 IGHV2-26A0A0B4J1V2 119 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 C9JAW5 83 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 CTSBP07858 339 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 APOBEC3AP31941 199 aaPredicted RBP8.69□□□□□ -1.02
VCL-201ENST00000211998 TREML4Q6UXN2 200 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 RNF182Q8N6D2 247 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 CCL19Q99731 98 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 SCRT1Q9BWW7 348 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 YAE1D1Q9NRH1 226 aa8.69□□□□□ -1.02
VCL-201ENST00000211998 B5MCH6 92 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 IGLV3-19P01714 112 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 GLRXP35754 106 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 SLC25A48Q6ZT89 311 aaKnown RBP8.68□□□□□ -1.02
VCL-201ENST00000211998 IGHV3OR16-13A0A075B7E8 117 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 IGHV3-74A0A0B4J1X5 117 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 IGLL1P15814 213 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 ORMDL2Q53FV1 153 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 PIKFYVEQ9Y2I7 2098 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 COL4A1P02462 1669 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 WNK3Q9BYP7 1800 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 NCR2O95944 276 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 TEX43Q6ZNM6 134 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 OR13A1Q8NGR1 328 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 PSG8Q9UQ74 426 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 CNTFRP26992 372 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 LINC01559Q495D7 138 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 SRSF8Q9BRL6 282 aaKnown RBP8.68□□□□□ -1.02
VCL-201ENST00000211998 GGTLC1Q9BX51 225 aa8.68□□□□□ -1.02
VCL-201ENST00000211998 RBMY1BA6NDE4 496 aaKnown RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 RBMY1EA6NEQ0 496 aaKnown RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 RBMY1DP0C7P1 496 aaKnown RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 RBMY1A1P0DJD3 496 aaKnown RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 RBMY1CP0DJD4 496 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 BOD1L2Q8IYS8 172 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 OSR1Q8TAX0 266 aaPredicted RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 ZNF319Q9P2F9 582 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 FABP5P3A8MUU1 101 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 FOXA2Q9Y261 457 aaPredicted RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 S4R3C0 116 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 POLR2AP24928 1970 aaKnown RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 PPIFP30405 207 aaKnown RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 NMSQ5H8A3 153 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 ATP1A1-AS1Q5TC04 95 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 ZC2HC1BQ5TFG8 222 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 ZNRF1Q8ND25 227 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 PPDPFLQ8WWR9 84 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 LYZL4Q96KX0 146 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 CHCHD2Q9Y6H1 151 aaPredicted RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 IGHV3-64A0A075B6Q5 118 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 NPPCP23582 126 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 LAGE3Q14657 143 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 TMEM101Q96IK0 257 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 TNFRSF18Q9Y5U5 241 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 ATG2BQ96BY7 2078 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 A0A1W2PPM0 123 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 TM4SF5O14894 197 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 CEACAM4O75871 244 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 FDCSPQ8NFU4 85 aa8.67□□□□□ -1.02
VCL-201ENST00000211998 NEU4Q8WWR8 484 aaPredicted RBP8.67□□□□□ -1.02
VCL-201ENST00000211998 GAGE5Q13069 117 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 GAGE6Q13070 117 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 IGHV3-66A0A0C4DH42 116 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 GAGE12JA6NER3 117 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 MMP23AO75900 390 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 GAGE7O76087 117 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 TIAF1O95411 115 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 GAGE12FP0CL80 117 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 GAGE12GP0CL81 117 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 GAGE12IP0CL82 117 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 SAA1P0DJI8 122 aaPredicted RBP8.66□□□□□ -1.02
VCL-201ENST00000211998 GAGE4Q13068 117 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 BVES-AS1Q5T3Y7 98 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 C18orf32Q8TCD1 76 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 DCTN5Q9BTE1 182 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 C15orf61A6NNL5 157 aa8.66□□□□□ -1.02
VCL-201ENST00000211998 MRPS18CQ9Y3D5 142 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms