RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 FBLN5Q9UBX5 448 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 PRRC2AP48634 2157 aaKnown RBP8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 WNT2P09544 360 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 ZNF324BQ6AW86 544 aaPredicted RBP8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 Q96MF0 132 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 NEU1Q99519 415 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 PHLDA3Q9Y5J5 127 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 KIAA1644Q3SXP7 199 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 RNF212Q495C1 297 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 IL17RELQ6ZVW7 336 aa8.36□□□□□ -1.07
SMARCA1-205ENST00000617310 TRAV3A0A0B4J244 114 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 A8MWL6 223 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 SIAH2O43255 324 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 MAS1LP35410 378 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 SAA4P35542 130 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 BEX4Q9NWD9 120 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 AP4M1O00189 453 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 TGOLN2O43493 480 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 GCHFRP30047 84 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 BTCP35070 178 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 C3orf36Q3SXR2 165 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 GSX1Q9H4S2 264 aaPredicted RBP8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 ACANP16112 2415 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 TCRBV4S1A1TA0A5B7 111 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 PTTG1IPP53801 180 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 CD69Q07108 199 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 TMEM42Q69YG0 159 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 CLDND2Q8NHS1 167 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 SEC11CQ9BY50 192 aa8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 SPENQ96T58 3664 aaKnown RBP8.35□□□□□ -1.07
SMARCA1-205ENST00000617310 ELOA3CA0A087WX78 387 aaPredicted RBP8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 GCSAMLQ5JQS6 135 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 FAM162BQ5T6X4 162 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 MIR17HGQ75NE6 70 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 KLK15Q9H2R5 256 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 IGHV1-3A0A0C4DH29 117 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 SOD3P08294 240 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 G0S2P27469 103 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 ZNF343Q6P1L6 599 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 NACAE9PAV3 2078 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 NCOA6Q14686 2063 aaPredicted RBP8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 C15orf61A6NNL5 157 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 H0YIZ8 118 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 M0R381 172 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 GGCTO75223 188 aaKnown RBP8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 NAPSAO96009 420 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 OR8A1Q8NGG7 326 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 M0R2Z0 102 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 NPFFO15130 113 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 RPL29P47914 159 aaKnown RBP8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 OR52E5Q8NH55 327 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 SLX1AQ9BQ83 275 aa8.34□□□□□ -1.07
SMARCA1-205ENST00000617310 LINC00473A8K010 186 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 ETV2O00321 342 aaPredicted RBP8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 IGKV1-16P04430 117 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 WDR73Q6P4I2 378 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 PARLQ9H300 379 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 GRIFINA4D1Z8 144 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 CD8AP01732 235 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 PYYP10082 97 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 ANOS1P23352 680 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 Q1RN00 199 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 C15orf32Q32M92 178 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 C2orf83Q53S99 150 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 LHFPL5Q8TAF8 219 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 ELOVL1Q9BW60 279 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 DSCR9P59020 149 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 Q6P435 159 aa8.33□□□□□ -1.08
SMARCA1-205ENST00000617310 TPTE2P1Q5T6R2 138 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 FAM159AQ6UWV7 190 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 JMJD8Q96S16 334 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 TRAV41A0A0B4J266 112 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 MSMBP08118 114 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 BTF3P20290 206 aaKnown RBP8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 ATP5G3P48201 142 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 RSPO1Q2MKA7 263 aaPredicted RBP8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 PUSL1Q8N0Z8 303 aaKnown RBP8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 TEX45Q8NA69 505 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 IGFBPL1Q8WX77 278 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 ANAPC16Q96DE5 110 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 RNF222A6NCQ9 220 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 ZNF585BQ52M93 769 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 CENPWQ5EE01 88 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 ZNF383Q8NA42 475 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 VPS13AQ96RL7 3174 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 ISLRO14498 428 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 CKS2P33552 79 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 CR1LQ2VPA4 569 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 FOXL2NBQ6ZUU3 175 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 RNF125Q96EQ8 232 aa8.32□□□□□ -1.08
SMARCA1-205ENST00000617310 LDLRAD4O15165 306 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 DANCRP0C864 163 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 LY6G6FQ5SQ64 297 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 CYB5R2Q6BCY4 276 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 WDR86Q86TI4 376 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 MOB4Q9Y3A3 225 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 TRAV14DV4A0A0A6YYC5 116 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 TEX50A0A1B0GTY4 177 aa8.31□□□□□ -1.08
SMARCA1-205ENST00000617310 PSMB11A5LHX3 300 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms