RNA–Protein interactions for RNA: ENST00000610884.4

SNAPC3-207, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-207ENST00000610884 SERF2P84101 59 aa14.58□□□□□ -0.07
SNAPC3-207ENST00000610884 AARDQ4LEZ3 155 aa14.58□□□□□ -0.07
SNAPC3-207ENST00000610884 SLC24A4Q8NFF2 622 aa14.58□□□□□ -0.07
SNAPC3-207ENST00000610884 HIST1H2BLQ99880 126 aa14.58□□□□□ -0.07
SNAPC3-207ENST00000610884 PRNDQ9UKY0 176 aa14.58□□□□□ -0.07
SNAPC3-207ENST00000610884 PLA2G2AP14555 144 aa14.58□□□□□ -0.08
SNAPC3-207ENST00000610884 MC5RP33032 325 aa14.58□□□□□ -0.08
SNAPC3-207ENST00000610884 PLGLAQ15195 96 aa14.58□□□□□ -0.08
SNAPC3-207ENST00000610884 PSG5Q15238 335 aa14.58□□□□□ -0.08
SNAPC3-207ENST00000610884 TAF15Q92804 592 aaKnown RBP eCLIP14.58□□□□□ -0.08
SNAPC3-207ENST00000610884 CIB3Q96Q77 187 aaPredicted RBP14.58□□□□□ -0.08
SNAPC3-207ENST00000610884 SH2D7A6NKC9 451 aaPredicted RBP14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 ODF3BA8MYP8 253 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 VENTXO95231 258 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 AREGP15514 252 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 MMDQ15546 238 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 C16orf82Q7Z2V1 217 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 PINX1Q96BK5 328 aaKnown RBP14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 RPUSD4Q96CM3 377 aaKnown RBP14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 TGOLN2O43493 480 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 RBP4P02753 201 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 NPY1RP25929 384 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 CD81P60033 236 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 PRCDQ00LT1 54 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 OR4X1Q8NH49 305 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 OR52E5Q8NH55 327 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 SLC25A22Q9H936 323 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 SLC39A9Q9NUM3 307 aa14.57□□□□□ -0.08
SNAPC3-207ENST00000610884 FAM90A9PA6NNJ1 464 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 SAA4P35542 130 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 CLEC12BQ2HXU8 276 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 ARSJQ5FYB0 599 aaPredicted RBP14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 RPP25LQ8N5L8 163 aaKnown RBP14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 SSMEM1Q8WWF3 244 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 C22orf15Q8WYQ4 148 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 C1orf159Q96HA4 380 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 CTDSP1Q9GZU7 261 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 NDUFA4L2Q9NRX3 87 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 NAT8Q9UHE5 227 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 NOTCH2Q04721 2471 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 MEF2BQ02080 365 aaPredicted RBP14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 ACSM6Q6P461 480 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 CFHR4Q92496 578 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 PITPNC1Q9UKF7 332 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 SIGLEC9Q9Y336 463 aa14.56□□□□□ -0.08
SNAPC3-207ENST00000610884 NCBP2LA6PVI3 153 aaKnown RBP14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 VWC2LB2RUY7 222 aa14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 GATA2P23769 480 aaPredicted RBP14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 CD1BP29016 333 aa14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 SSBP2P81877 361 aaPredicted RBP14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 TMEM167AQ8TBQ9 72 aa14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 AJUBAQ96IF1 538 aa14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 SONP18583 2426 aaKnown RBP14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 ITPR3Q14573 2671 aa14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 PRSS46E5RG02 174 aa14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 AVPP01185 164 aa14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 DDTP30046 118 aa14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 VMA21Q3ZAQ7 101 aa14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 FAM71F2Q6NXP2 309 aa14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 OR2T6Q8NHC8 308 aa14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 AMMECR1Q9Y4X0 333 aaPredicted RBP14.55□□□□□ -0.08
SNAPC3-207ENST00000610884 PDZD2O15018 2839 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 CENPVL3A0A0U1RRI6 287 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 TSTD3H0UI37 97 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 SOX15O60248 233 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 USF1P22415 310 aaPredicted RBP14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 PKIAP61925 76 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 TREML4Q6UXN2 200 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 CYP2G1PQ6ZSU1 146 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 PPP1R27Q86WC6 154 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 TMEM183AQ8IXX5 376 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 EAF1Q96JC9 268 aaPredicted RBP14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 ACANP16112 2415 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 TRAV40A0A0B4J280 105 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 IGHV4-38-2P0DP08 117 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 TMEM241Q24JQ0 296 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 GATAD1Q8WUU5 269 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 TMEM147Q9BVK8 224 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 ELOVL1Q9BW60 279 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 NPCDR1Q9BY65 106 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 SRD5A3Q9H8P0 318 aa14.54□□□□□ -0.08
SNAPC3-207ENST00000610884 FOXH1O75593 365 aa14.53□□□□□ -0.08
SNAPC3-207ENST00000610884 ACTL6BO94805 426 aa14.53□□□□□ -0.08
SNAPC3-207ENST00000610884 PRSS8Q16651 343 aa14.53□□□□□ -0.08
SNAPC3-207ENST00000610884 BSXQ3C1V8 233 aa14.53□□□□□ -0.08
SNAPC3-207ENST00000610884 OR1L8Q8NGR8 309 aa14.53□□□□□ -0.08
SNAPC3-207ENST00000610884 A0A1B0GV90 55 aa14.53□□□□□ -0.08
SNAPC3-207ENST00000610884 RNF223E7ERA6 249 aa14.53□□□□□ -0.08
SNAPC3-207ENST00000610884 RPL23P62829 140 aaKnown RBP14.53□□□□□ -0.08
SNAPC3-207ENST00000610884 PDLIM3Q53GG5 364 aaPredicted RBP14.53□□□□□ -0.08
SNAPC3-207ENST00000610884 MRPL36Q9P0J6 103 aaKnown RBP14.53□□□□□ -0.08
SNAPC3-207ENST00000610884 CREBBPQ92793 2442 aa14.52□□□□□ -0.08
SNAPC3-207ENST00000610884 UNC79Q9P2D8 2635 aa14.52□□□□□ -0.08
SNAPC3-207ENST00000610884 J3QKU1 62 aa14.52□□□□□ -0.08
SNAPC3-207ENST00000610884 PFN1P07737 140 aaKnown RBP14.52□□□□□ -0.08
SNAPC3-207ENST00000610884 RNASE2P10153 161 aaKnown RBP14.52□□□□□ -0.08
SNAPC3-207ENST00000610884 GALR1P47211 349 aa14.52□□□□□ -0.08
SNAPC3-207ENST00000610884 LGALS7P47929 136 aa14.52□□□□□ -0.08
SNAPC3-207ENST00000610884 KLF17Q5JT82 389 aaPredicted RBP14.52□□□□□ -0.08
SNAPC3-207ENST00000610884 OR5B3Q8NH48 314 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms