RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 P2RY1P47900 373 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 HOXA1P49639 335 aaPredicted RBP13.01□□□□□ -0.33
MKS1-209ENST00000580127 TRPT1Q86TN4 253 aaKnown RBP13.01□□□□□ -0.33
MKS1-209ENST00000580127 RRNAD1Q96FB5 475 aaKnown RBP13.01□□□□□ -0.33
MKS1-209ENST00000580127 RNF126Q9BV68 326 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 C1QTNF4Q9BXJ3 329 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 TBC1D24Q9ULP9 559 aa13.01□□□□□ -0.33
MKS1-209ENST00000580127 AGRNO00468 2067 aa13□□□□□ -0.33
MKS1-209ENST00000580127 FRAS1Q86XX4 4008 aa13□□□□□ -0.33
MKS1-209ENST00000580127 A0A1B0GU03 582 aa13□□□□□ -0.33
MKS1-209ENST00000580127 RPS10-NUDT3A0A1W2PQS6 291 aa13□□□□□ -0.33
MKS1-209ENST00000580127 RBMY1A1P0DJD3 496 aaKnown RBP13□□□□□ -0.33
MKS1-209ENST00000580127 RBMY1CP0DJD4 496 aa13□□□□□ -0.33
MKS1-209ENST00000580127 RND3P61587 244 aa13□□□□□ -0.33
MKS1-209ENST00000580127 RBMY1FQ15415 496 aaKnown RBP13□□□□□ -0.33
MKS1-209ENST00000580127 SPINK9Q5DT21 86 aa13□□□□□ -0.33
MKS1-209ENST00000580127 ACTL10Q5JWF8 245 aa13□□□□□ -0.33
MKS1-209ENST00000580127 SNX29P2Q8IUI4 249 aa13□□□□□ -0.33
MKS1-209ENST00000580127 OR4X1Q8NH49 305 aa13□□□□□ -0.33
MKS1-209ENST00000580127 RNASE11Q8TAA1 199 aaKnown RBP13□□□□□ -0.33
MKS1-209ENST00000580127 COMMD3Q9UBI1 195 aa13□□□□□ -0.33
MKS1-209ENST00000580127 IGHV4-4A0A075B6R2 117 aa12.99□□□□□ -0.33
MKS1-209ENST00000580127 ZNF705EA8MWA4 302 aaPredicted RBP12.99□□□□□ -0.33
MKS1-209ENST00000580127 B3GALNT1O75752 331 aa12.99□□□□□ -0.33
MKS1-209ENST00000580127 ZNF688P0C7X2 276 aa12.99□□□□□ -0.33
MKS1-209ENST00000580127 ETV6P41212 452 aa12.99□□□□□ -0.33
MKS1-209ENST00000580127 PIGPP57054 158 aa12.99□□□□□ -0.33
MKS1-209ENST00000580127 DHRS2Q13268 280 aa12.99□□□□□ -0.33
MKS1-209ENST00000580127 TRIM16LQ309B1 348 aa12.99□□□□□ -0.33
MKS1-209ENST00000580127 PVRIGQ6DKI7 326 aa12.99□□□□□ -0.33
MKS1-209ENST00000580127 FAM24BQ8N5W8 94 aa12.99□□□□□ -0.33
MKS1-209ENST00000580127 ZFAND1Q8TCF1 268 aa12.99□□□□□ -0.33
MKS1-209ENST00000580127 Q8WTZ3 238 aa12.99□□□□□ -0.33
MKS1-209ENST00000580127 KMT2AQ03164 3969 aa12.98□□□□□ -0.33
MKS1-209ENST00000580127 A0A0B4J293 547 aa12.98□□□□□ -0.33
MKS1-209ENST00000580127 C3orf85A0A1B0GTC6 90 aa12.98□□□□□ -0.33
MKS1-209ENST00000580127 P0DMU3 169 aa12.98□□□□□ -0.33
MKS1-209ENST00000580127 FAM231AP0DMU4 169 aa12.98□□□□□ -0.33
MKS1-209ENST00000580127 FAM231CP0DMU5 169 aa12.98□□□□□ -0.33
MKS1-209ENST00000580127 LSM3P62310 102 aaKnown RBP12.98□□□□□ -0.33
MKS1-209ENST00000580127 SNRPD3P62318 126 aaKnown RBP12.98□□□□□ -0.33
MKS1-209ENST00000580127 RNASE10Q5GAN6 216 aaKnown RBP12.98□□□□□ -0.33
MKS1-209ENST00000580127 CCDC71LQ8N9Z2 235 aa12.98□□□□□ -0.33
MKS1-209ENST00000580127 COPZ2Q9P299 210 aa12.98□□□□□ -0.33
MKS1-209ENST00000580127 KNCNA6PVL3 124 aa12.97□□□□□ -0.33
MKS1-209ENST00000580127 GIG44P09565 113 aaPredicted RBP12.97□□□□□ -0.33
MKS1-209ENST00000580127 RNASE2P10153 161 aaKnown RBP12.97□□□□□ -0.33
MKS1-209ENST00000580127 HTR2BP41595 481 aa12.97□□□□□ -0.33
MKS1-209ENST00000580127 IZUMO4Q1ZYL8 232 aa12.97□□□□□ -0.33
MKS1-209ENST00000580127 Q6ZTC4 211 aa12.97□□□□□ -0.33
MKS1-209ENST00000580127 RAB40CQ96S21 281 aa12.97□□□□□ -0.33
MKS1-209ENST00000580127 DEFB131BA0A096LNP1 70 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 IGKV1-5P01602 117 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 TBPP20226 339 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 TGFBR1P36897 503 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 PPP5CP53041 499 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 SPCS3P61009 180 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 MZT2AQ6P582 158 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 FAM219AQ8IW50 185 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 ARRDC1Q8N5I2 433 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 DCANP1Q8TF63 244 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 C15orf40Q8WUR7 153 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 NDUFAF3Q9BU61 184 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 SEPSECSQ9HD40 501 aaKnown RBP12.96□□□□□ -0.33
MKS1-209ENST00000580127 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.96□□□□□ -0.33
MKS1-209ENST00000580127 CACFD1Q9UGQ2 172 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 PFDN2Q9UHV9 154 aa12.96□□□□□ -0.33
MKS1-209ENST00000580127 A0A087WXM4 84 aa12.95□□□□□ -0.34
MKS1-209ENST00000580127 M0QYG6 137 aa12.95□□□□□ -0.34
MKS1-209ENST00000580127 SLC25A4P12235 298 aa12.95□□□□□ -0.34
MKS1-209ENST00000580127 PSMG4Q5JS54 123 aa12.95□□□□□ -0.34
MKS1-209ENST00000580127 ETFRF1Q6IPR1 90 aa12.95□□□□□ -0.34
MKS1-209ENST00000580127 NOXA1Q86UR1 476 aa12.95□□□□□ -0.34
MKS1-209ENST00000580127 POM121L12Q8N7R1 296 aa12.95□□□□□ -0.34
MKS1-209ENST00000580127 OR1S2Q8NGQ3 325 aa12.95□□□□□ -0.34
MKS1-209ENST00000580127 TP53RKQ96S44 253 aa12.95□□□□□ -0.34
MKS1-209ENST00000580127 HEYLQ9NQ87 328 aaPredicted RBP12.95□□□□□ -0.34
MKS1-209ENST00000580127 CLEC5AQ9NY25 188 aa12.95□□□□□ -0.34
MKS1-209ENST00000580127 X6R8D5 127 aa12.95□□□□□ -0.34
MKS1-209ENST00000580127 ELOA3CA0A087WX78 387 aaPredicted RBP12.94□□□□□ -0.34
MKS1-209ENST00000580127 FAM25AB3EWG3 89 aa12.94□□□□□ -0.34
MKS1-209ENST00000580127 FAM25CB3EWG5 89 aa12.94□□□□□ -0.34
MKS1-209ENST00000580127 FAM25GB3EWG6 89 aa12.94□□□□□ -0.34
MKS1-209ENST00000580127 HNRNPCP07910 306 aaKnown RBP eCLIP12.94□□□□□ -0.34
MKS1-209ENST00000580127 PI3P19957 117 aa12.94□□□□□ -0.34
MKS1-209ENST00000580127 YPEL3P61236 119 aaPredicted RBP12.94□□□□□ -0.34
MKS1-209ENST00000580127 MLANAQ16655 118 aa12.94□□□□□ -0.34
MKS1-209ENST00000580127 TIGITQ495A1 244 aa12.94□□□□□ -0.34
MKS1-209ENST00000580127 OR52E5Q8NH55 327 aa12.94□□□□□ -0.34
MKS1-209ENST00000580127 TERB2Q8NHR7 220 aa12.94□□□□□ -0.34
MKS1-209ENST00000580127 YIPF6Q96EC8 236 aa12.94□□□□□ -0.34
MKS1-209ENST00000580127 FNDC4Q9H6D8 234 aaPredicted RBP12.94□□□□□ -0.34
MKS1-209ENST00000580127 GSTZ1O43708 216 aaPredicted RBP12.93□□□□□ -0.34
MKS1-209ENST00000580127 IGKV1-17P01599 117 aa12.93□□□□□ -0.34
MKS1-209ENST00000580127 P0C879 139 aa12.93□□□□□ -0.34
MKS1-209ENST00000580127 ELK1P19419 428 aa12.93□□□□□ -0.34
MKS1-209ENST00000580127 RORCP51449 518 aa12.93□□□□□ -0.34
MKS1-209ENST00000580127 C16orf54Q6UWD8 224 aa12.93□□□□□ -0.34
MKS1-209ENST00000580127 CSNK1G2-AS1Q8NCQ2 148 aa12.93□□□□□ -0.34
MKS1-209ENST00000580127 RNASEH2CQ8TDP1 164 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms