RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PAX5Q02548 391 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 ZNF616Q08AN1 781 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 MADCAM1Q13477 382 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 LRRC75BQ2VPJ9 315 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 BSXQ3C1V8 233 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 ACSM3Q53FZ2 586 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 MUC21Q5SSG8 566 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 PRSS54Q6PEW0 395 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 ZNF497Q6ZNH5 498 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 FAM220AQ7Z4H9 259 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 LHFPL4Q7Z7J7 247 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 LYG2Q86SG7 212 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 KIR2DL5AQ8N109 375 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 ZNF664Q8N3J9 261 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 OR52L1Q8NGH7 329 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 OR6T1Q8NGN1 323 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 OR4A4PQ8NGN8 299 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 OR1B1Q8NGR6 318 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 OR52J3Q8NH60 311 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 SFXN5Q8TD22 340 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 SPRYD4Q8WW59 207 aaPredicted RBP4.05□□□□□ -1.76
SF3B3-214ENST00000572365 TMEM37Q8WXS4 190 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 H1FXQ92522 213 aaKnown RBP4.05□□□□□ -1.76
SF3B3-214ENST00000572365 RGP1Q92546 391 aaPredicted RBP4.05□□□□□ -1.76
SF3B3-214ENST00000572365 MCHR2Q969V1 340 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 TVP23CQ96ET8 276 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 AKR1E2Q96JD6 320 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 CNN2Q99439 309 aaKnown RBP4.05□□□□□ -1.76
SF3B3-214ENST00000572365 NIPSNAP3BQ9BS92 247 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 SNHG12Q9BXW3 62 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 EIF5A2Q9GZV4 153 aaKnown RBP4.05□□□□□ -1.76
SF3B3-214ENST00000572365 SLC25A31Q9H0C2 315 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 ARV1Q9H2C2 271 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 PRO1933Q9H354 126 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 RERGLQ9H628 205 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 EDA2RQ9HAV5 297 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 TAF9BQ9HBM6 251 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 SLC2A8Q9NY64 477 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 IKZF2Q9UKS7 526 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 TSSC4Q9Y5U2 329 aaPredicted RBP4.05□□□□□ -1.76
SF3B3-214ENST00000572365 V9GY05 133 aa4.05□□□□□ -1.76
SF3B3-214ENST00000572365 TRAV14DV4A0A0A6YYC5 116 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 A0A1W2PPE3 182 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 PLPP3O14495 311 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 TBX19O60806 448 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 HIST1H2BKO60814 126 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 BGLAPP02818 100 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 HIST1H2BJP06899 126 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 CD37P11049 281 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 PTHLHP12272 177 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 RPS4Y1P22090 263 aaKnown RBP4.04□□□□□ -1.76
SF3B3-214ENST00000572365 HIST1H2BOP23527 126 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 CD24P25063 80 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 HIST1H2BBP33778 126 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 CEBPDP49716 269 aaPredicted RBP4.04□□□□□ -1.76
SF3B3-214ENST00000572365 AKR1C2P52895 323 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 PRRX1P54821 245 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 NDUFV3P56181 108 aaKnown RBP4.04□□□□□ -1.76
SF3B3-214ENST00000572365 CAV3P56539 151 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 HIST1H2BDP58876 126 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 UBE2KP61086 200 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 HIST1H2BCP62807 126 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 FMODQ06828 376 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 ST3GAL3Q11203 375 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 OR5I1Q13606 314 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 HIST2H2BEQ16778 126 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 DEFB136Q30KP8 78 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 MORN2Q502X0 79 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 CLEC12AQ5QGZ9 265 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.04□□□□□ -1.76
SF3B3-214ENST00000572365 OR2G6Q5TZ20 316 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 STEAP1BQ6NZ63 245 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 TOMM20LQ6UXN7 152 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 DPPA3Q6W0C5 159 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 ZNF705AQ6ZN79 300 aaPredicted RBP4.04□□□□□ -1.76
SF3B3-214ENST00000572365 TCF24Q7RTU0 167 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 TMED4Q7Z7H5 227 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 LINC01551Q86U37 167 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 SLC25A42Q86VD7 318 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 KRTAP7-1Q8IUC3 87 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 H1FOOQ8IZA3 346 aaPredicted RBP4.04□□□□□ -1.76
SF3B3-214ENST00000572365 ZNRF1Q8ND25 227 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 SLC26A10Q8NG04 563 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 OR2T33Q8NG76 320 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 OR4C5Q8NGB2 326 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 OR4B1Q8NGF8 309 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 OR4D6Q8NGJ1 314 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 OR1P1Q8NH06 330 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 OR5B3Q8NH48 314 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 CD300LFQ8TDQ1 290 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 MITD1Q8WV92 249 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 PPP1R1CQ8WVI7 109 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 DCUN1D4Q92564 292 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 HIST1H2BHQ93079 126 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 RASD2Q96D21 266 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 SLC35E1Q96K37 410 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 PRRC1Q96M27 445 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 TP53RKQ96S44 253 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 HIST1H2BNQ99877 126 aa4.04□□□□□ -1.76
SF3B3-214ENST00000572365 HIST1H2BMQ99879 126 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms