RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 PSG11Q9UQ72 335 aa8.23□□□□□ -1.09
TPM1-212ENST00000558347 SMCO3A2RU48 225 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 SLC31A2O15432 143 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 ST8SIA5O15466 376 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 MPDU1O75352 247 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 KRASP01116 189 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 FGF7P21781 194 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 FGF8P55075 233 aaPredicted RBP8.22□□□□□ -1.09
TPM1-212ENST00000558347 ELLP55199 621 aaPredicted RBP8.22□□□□□ -1.09
TPM1-212ENST00000558347 CD81P60033 236 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 ZNF816Q0VGE8 651 aaPredicted RBP8.22□□□□□ -1.09
TPM1-212ENST00000558347 UTF1Q5T230 341 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 ZNF343Q6P1L6 599 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 SLC16A13Q7RTY0 426 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 RPP25LQ8N5L8 163 aaKnown RBP8.22□□□□□ -1.09
TPM1-212ENST00000558347 OR52E5Q8NH55 327 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 OR9G1Q8NH87 305 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 FAM210BQ96KR6 192 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 GGACTQ9BVM4 153 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 TMEM133Q9H2Q1 129 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 NIT2Q9NQR4 276 aa8.22□□□□□ -1.09
TPM1-212ENST00000558347 TGIF2-C20orf24A0A0A6YYL0 155 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 CYB5BO43169 146 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 S100A2P29034 98 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 GPR12P47775 334 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 BRWD1-AS2P59051 145 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 TMEM241Q24JQ0 296 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 ACOT6Q3I5F7 207 aaPredicted RBP8.21□□□□□ -1.1
TPM1-212ENST00000558347 FFAR4Q5NUL3 377 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 ACSM6Q6P461 480 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 OR11H6Q8NGC7 330 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 OR10G9Q8NGN4 311 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 OR10G7Q8NGN6 311 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 LEAP2Q969E1 77 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 PYGO2Q9BRQ0 406 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 GSN-AS1Q9NRJ2 163 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 DOK5Q9P104 306 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 SIGLEC9Q9Y336 463 aa8.21□□□□□ -1.1
TPM1-212ENST00000558347 TBL2Q9Y4P3 447 aaKnown RBP8.21□□□□□ -1.1
TPM1-212ENST00000558347 IGHV2-26A0A0B4J1V2 119 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 MARCH11A6NNE9 402 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 J3QR06 171 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HIST1H2BKO60814 126 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 PROP1O75360 226 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HPRT1P00492 218 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 IGKV1D-33P01593 117 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 IGKV1-33P01594 117 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 IGLV1-47P01700 117 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HIST1H2BJP06899 126 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HIST1H2BOP23527 126 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HIST1H2BBP33778 126 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 ZNF137PP52743 207 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HIST1H2BDP58876 126 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 SPCS3P61009 180 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HIST1H2BCP62807 126 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HIST2H2BEQ16778 126 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.2□□□□□ -1.1
TPM1-212ENST00000558347 FAM71F2Q6NXP2 309 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 ABHD12Q8N2K0 398 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HIST1H2BHQ93079 126 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 R3HDM4Q96D70 268 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HIST1H2BNQ99877 126 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 HIST1H2BMQ99879 126 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 SMIM7Q9BQ49 75 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 TXNDC17Q9BRA2 123 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 CLEC7AQ9BXN2 247 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 NPCDR1Q9BY65 106 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 GAR1Q9NY12 217 aaKnown RBP8.2□□□□□ -1.1
TPM1-212ENST00000558347 WDR83OSQ9Y284 106 aa8.2□□□□□ -1.1
TPM1-212ENST00000558347 SAA2-SAA4A0A096LPE2 208 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 LINC00473A8K010 186 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 C15orf62A8K5M9 175 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 WIPF1O43516 503 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 IGHV3-7P01780 117 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 SAA2P0DJI9 122 aaPredicted RBP8.19□□□□□ -1.1
TPM1-212ENST00000558347 DUTP33316 252 aaKnown RBP8.19□□□□□ -1.1
TPM1-212ENST00000558347 GNG10P50151 68 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 NDUFA6P56556 154 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 SSX2Q16385 188 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 OR2B11Q5JQS5 317 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 LYG1Q8N1E2 194 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 ANAPC16Q96DE5 110 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 S1PR3Q99500 378 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 SRD5A3Q9H8P0 318 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 KCNIP2Q9NS61 270 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 TCF19Q9Y242 345 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 URGCP-MRPS24S4R325 110 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 M0QZ24 198 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 PHOX2AO14813 284 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 TIMM23O14925 209 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 PPP1R2P9O14990 202 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 PFN1P07737 140 aaKnown RBP8.19□□□□□ -1.1
TPM1-212ENST00000558347 PRRX1P54821 245 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 ERVK-16P61578 105 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 BSXQ3C1V8 233 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 HIST2H2BDQ6DRA6 164 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 ZNF833PQ6ZTB9 187 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 TMEM219Q86XT9 240 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 HIST3H2BBQ8N257 126 aa8.19□□□□□ -1.1
TPM1-212ENST00000558347 OR4P4Q8NGL7 312 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms