RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 PDLIM4P50479 330 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 PPT1P50897 306 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 DSCR9P59020 149 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 SUMO2P61956 95 aaKnown RBP3.56□□□□□ -1.84
SRP54-212ENST00000556992 CCL20P78556 96 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 RUNX1Q01196 453 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 AKR1C1Q04828 323 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 BTN1A1Q13410 526 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 PSG5Q15238 335 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 PRSS8Q16651 343 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 TMEM249Q2WGJ8 235 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 KHDC3LQ587J8 217 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 SPINK9Q5DT21 86 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 SOHLH1Q5JUK2 328 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 FFAR4Q5NUL3 377 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 TPTE2P1Q5T6R2 138 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 MINOS1Q5TGZ0 78 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 ETFRF1Q6IPR1 90 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 CCDC144NLQ6NUI1 221 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 SPSB3Q6PJ21 355 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 MMD2Q8IY49 270 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 PNKDQ8N490 385 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 SUN5Q8TC36 379 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 RNASEH2CQ8TDP1 164 aaKnown RBP3.56□□□□□ -1.84
SRP54-212ENST00000556992 RSG1Q9BU20 258 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 C19orf24Q9BVV8 132 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 NPCDR1Q9BY65 106 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 NARFLQ9H6Q4 476 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 NDUFA4L2Q9NRX3 87 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 ZNRD1Q9P1U0 126 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 FAM96BQ9Y3D0 163 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 MINOS1-NBL1R4GNA1 71 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 COL6A6A6NMZ7 2263 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 TACC2O95359 2948 aa3.56□□□□□ -1.84
SRP54-212ENST00000556992 ANKHD1Q8IWZ3 2542 aaKnown RBP3.55□□□□□ -1.84
SRP54-212ENST00000556992 MED12LQ86YW9 2145 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 CTXND1A0A1B0GTU2 59 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 MAP1LC3B2A6NCE7 125 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 C9JQL5 133 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 PRSS46E5RG02 174 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 SLC25A17O43808 307 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 NDUFS6O75380 124 aaKnown RBP3.55□□□□□ -1.84
SRP54-212ENST00000556992 FOXH1O75593 365 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 IGLV2-23P01705 113 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 OPN1MWP04001 364 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 CRYGBP07316 175 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 SNRNP70P08621 437 aaKnown RBP3.55□□□□□ -1.84
SRP54-212ENST00000556992 OPN1MW2P0DN77 364 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 OPN1MW3P0DN78 364 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 OR13C7P0DN81 318 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 COX7A1P24310 79 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 CDKN1AP38936 164 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 RPL29P47914 159 aaKnown RBP3.55□□□□□ -1.84
SRP54-212ENST00000556992 PSMB3P49720 205 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 LMO4P61968 165 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 DIAPH2-AS1Q14236 149 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 BSXQ3C1V8 233 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 ODF3L2Q3SX64 289 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 ZNF506Q5JVG8 444 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 LCN15Q6UWW0 184 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 TMEM144Q7Z5S9 345 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 SLC35E3Q7Z769 313 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 RPP25LQ8N5L8 163 aaKnown RBP3.55□□□□□ -1.84
SRP54-212ENST00000556992 Q8N7P7 452 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 OR4P4Q8NGL7 312 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 OR1L6Q8NGR2 347 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 CLDND2Q8NHS1 167 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 NANPQ8TBE9 248 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 WIPF2Q8TF74 440 aaPredicted RBP3.55□□□□□ -1.84
SRP54-212ENST00000556992 TMEM170AQ8WVE7 144 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 MALSU1Q96EH3 234 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 P2RX4Q99571 388 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 RARRES2Q99969 163 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 SRSF8Q9BRL6 282 aaKnown RBP3.55□□□□□ -1.84
SRP54-212ENST00000556992 SCRT1Q9BWW7 348 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 NKX6-2Q9C056 277 aaPredicted RBP3.55□□□□□ -1.84
SRP54-212ENST00000556992 MAP1LC3BQ9GZQ8 125 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 TMEM231Q9H6L2 316 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 ZNF430Q9H8G1 570 aaPredicted RBP3.55□□□□□ -1.84
SRP54-212ENST00000556992 LPAR2Q9HBW0 351 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 GNG13Q9P2W3 67 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 VAX2Q9UIW0 290 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 SIGLEC9Q9Y336 463 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 LSM4Q9Y4Z0 139 aaKnown RBP3.55□□□□□ -1.84
SRP54-212ENST00000556992 RFNGQ9Y644 331 aa3.55□□□□□ -1.84
SRP54-212ENST00000556992 NBEAL1Q6ZS30 2694 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 IGHV2-70DA0A0C4DH43 119 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 LOC102723971A0A1B0GUV8 181 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 A0A1B0GV50 99 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 A0A1W2PPR1 153 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 ODF3BA8MYP8 253 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 SEC14L6B5MCN3 397 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 FAM157AC9JC47 383 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 CORTO00230 105 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 TIMM23O14925 209 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 SPRY2O43597 315 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 SCO1O75880 301 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 CNIH1O95406 144 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 MT-CO2P00403 227 aa3.54□□□□□ -1.84
SRP54-212ENST00000556992 MOSP00540 346 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms