RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 M0R1B8 84 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 COX7A2P2O60397 106 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 KLF5Q13887 457 aaPredicted RBP14.25□□□□□ -0.13
SYNE3-202ENST00000553340 TMEM30BQ3MIR4 351 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 ASPHD1Q5U4P2 390 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 NUDT10Q8NFP7 164 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 ORAOV1Q8WV07 137 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 NUDT11Q96G61 164 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 PAXXQ9BUH6 204 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 RPUSD1Q9UJJ7 312 aaKnown RBP14.25□□□□□ -0.13
SYNE3-202ENST00000553340 TECTAO75443 2155 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 FAM181BA6NEQ2 426 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 M0R2Z0 102 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 PEX7O00628 323 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 PYYP10082 97 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 GLRXP35754 106 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 CCL11P51671 97 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 DEFB108BQ8NET1 73 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 LINC00574Q9H8X3 128 aa14.25□□□□□ -0.13
SYNE3-202ENST00000553340 GATA4P43694 442 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 MAJINQ3KP22 176 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 GDF5OSQ5U4N7 250 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 C10orf113Q5VZT2 155 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 ZNF329Q86UD4 541 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 OR1L4Q8NGR5 311 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 RND1Q92730 232 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 WDFY4Q6ZS81 3184 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 TRAV9-2A0A087WT02 112 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 PCNX2A6NKB5 2137 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 TM4SF5O14894 197 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 OSR1Q8TAX0 266 aaPredicted RBP14.24□□□□□ -0.13
SYNE3-202ENST00000553340 GAFA1Q96PS6 74 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 NDUFA4L2Q9NRX3 87 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 DKK4Q9UBT3 224 aa14.24□□□□□ -0.13
SYNE3-202ENST00000553340 HIST1H1EP10412 219 aaKnown RBP14.23□□□□□ -0.13
SYNE3-202ENST00000553340 PRR27Q6MZM9 219 aa14.23□□□□□ -0.13
SYNE3-202ENST00000553340 FDCSPQ8NFU4 85 aa14.23□□□□□ -0.13
SYNE3-202ENST00000553340 CCL13Q99616 98 aa14.23□□□□□ -0.13
SYNE3-202ENST00000553340 ALKBH7Q9BT30 221 aaPredicted RBP14.23□□□□□ -0.13
SYNE3-202ENST00000553340 ZNRD1Q9P1U0 126 aa14.23□□□□□ -0.13
SYNE3-202ENST00000553340 OR2J3O76001 311 aa14.23□□□□□ -0.13
SYNE3-202ENST00000553340 BPIFB3P59826 476 aa14.23□□□□□ -0.13
SYNE3-202ENST00000553340 RPL8P62917 257 aaKnown RBP14.23□□□□□ -0.13
SYNE3-202ENST00000553340 RNASEKQ6P5S7 137 aaKnown RBP14.23□□□□□ -0.13
SYNE3-202ENST00000553340 OR8B3Q8NGG8 313 aa14.23□□□□□ -0.13
SYNE3-202ENST00000553340 HARBI1Q96MB7 349 aa14.23□□□□□ -0.13
SYNE3-202ENST00000553340 OR8B2Q96RD0 313 aa14.23□□□□□ -0.13
SYNE3-202ENST00000553340 TNFRSF19Q9NS68 423 aa14.23□□□□□ -0.13
SYNE3-202ENST00000553340 APOA2P02652 100 aa14.22□□□□□ -0.13
SYNE3-202ENST00000553340 HINT1P49773 126 aaPredicted RBP14.22□□□□□ -0.13
SYNE3-202ENST00000553340 Q56UQ5 140 aa14.22□□□□□ -0.13
SYNE3-202ENST00000553340 EBLN2Q6P2I7 272 aa14.22□□□□□ -0.13
SYNE3-202ENST00000553340 FAM216BQ8N7L0 139 aa14.22□□□□□ -0.13
SYNE3-202ENST00000553340 IGHV2-26A0A0B4J1V2 119 aa14.22□□□□□ -0.13
SYNE3-202ENST00000553340 HIGD1CA8MV81 97 aa14.22□□□□□ -0.13
SYNE3-202ENST00000553340 CAMPP49913 170 aa14.22□□□□□ -0.13
SYNE3-202ENST00000553340 UBE2G1P62253 170 aa14.22□□□□□ -0.13
SYNE3-202ENST00000553340 ZNF430Q9H8G1 570 aaPredicted RBP14.22□□□□□ -0.13
SYNE3-202ENST00000553340 IGLV3-9A0A075B6K5 115 aa14.21□□□□□ -0.13
SYNE3-202ENST00000553340 CDX4O14627 284 aaPredicted RBP14.21□□□□□ -0.13
SYNE3-202ENST00000553340 PTTG1IPP53801 180 aa14.21□□□□□ -0.13
SYNE3-202ENST00000553340 ZNF833PQ6ZTB9 187 aa14.21□□□□□ -0.13
SYNE3-202ENST00000553340 ATP5L2Q7Z4Y8 100 aa14.21□□□□□ -0.13
SYNE3-202ENST00000553340 SSBP4Q9BWG4 385 aaPredicted RBP14.21□□□□□ -0.13
SYNE3-202ENST00000553340 CADP27708 2225 aa14.21□□□□□ -0.13
SYNE3-202ENST00000553340 TRAV17A0A0B4J275 112 aa14.21□□□□□ -0.14
SYNE3-202ENST00000553340 A0A1W2PN81 502 aa14.21□□□□□ -0.14
SYNE3-202ENST00000553340 INS-IGF2F8WCM5 200 aa14.21□□□□□ -0.14
SYNE3-202ENST00000553340 GPR6P46095 362 aaPredicted RBP14.21□□□□□ -0.14
SYNE3-202ENST00000553340 SSBP2P81877 361 aaPredicted RBP14.21□□□□□ -0.14
SYNE3-202ENST00000553340 TNFAIP6P98066 277 aaPredicted RBP14.21□□□□□ -0.14
SYNE3-202ENST00000553340 ZNF788Q6ZQV5 615 aa14.21□□□□□ -0.14
SYNE3-202ENST00000553340 GPR179Q6PRD1 2367 aa14.21□□□□□ -0.14
SYNE3-202ENST00000553340 TCRBV4S1A1TA0A5B7 111 aa14.2□□□□□ -0.14
SYNE3-202ENST00000553340 hADV38S2A0JD32 116 aa14.2□□□□□ -0.14
SYNE3-202ENST00000553340 PATE2Q6UY27 113 aa14.2□□□□□ -0.14
SYNE3-202ENST00000553340 NPIPB3Q92617 1050 aa14.2□□□□□ -0.14
SYNE3-202ENST00000553340 FXYD5Q96DB9 178 aa14.2□□□□□ -0.14
SYNE3-202ENST00000553340 MRPL20Q9BYC9 149 aaKnown RBP14.2□□□□□ -0.14
SYNE3-202ENST00000553340 C2orf70A6NJV1 201 aa14.2□□□□□ -0.14
SYNE3-202ENST00000553340 H0YJW9 148 aa14.2□□□□□ -0.14
SYNE3-202ENST00000553340 NKX2-8O15522 239 aa14.2□□□□□ -0.14
SYNE3-202ENST00000553340 TIMM23BQ5SRD1 257 aa14.2□□□□□ -0.14
SYNE3-202ENST00000553340 CCL25O15444 150 aa14.19□□□□□ -0.14
SYNE3-202ENST00000553340 IGLL1P15814 213 aa14.19□□□□□ -0.14
SYNE3-202ENST00000553340 SUB1P53999 127 aaKnown RBP eCLIP14.19□□□□□ -0.14
SYNE3-202ENST00000553340 FAM162BQ5T6X4 162 aa14.19□□□□□ -0.14
SYNE3-202ENST00000553340 ZNF738Q8NE65 137 aa14.19□□□□□ -0.14
SYNE3-202ENST00000553340 FLYWCH2Q96CP2 140 aaKnown RBP14.19□□□□□ -0.14
SYNE3-202ENST00000553340 FNDC4Q9H6D8 234 aaPredicted RBP14.19□□□□□ -0.14
SYNE3-202ENST00000553340 C7orf69Q9H7B7 122 aa14.19□□□□□ -0.14
SYNE3-202ENST00000553340 RAI1Q7Z5J4 1906 aaPredicted RBP14.18□□□□□ -0.14
SYNE3-202ENST00000553340 E7EUB6 86 aa14.18□□□□□ -0.14
SYNE3-202ENST00000553340 GNG5P63218 68 aa14.18□□□□□ -0.14
SYNE3-202ENST00000553340 PDPNQ86YL7 162 aa14.18□□□□□ -0.14
SYNE3-202ENST00000553340 RBMXL3Q8N7X1 1067 aaKnown RBP14.18□□□□□ -0.14
SYNE3-202ENST00000553340 LINC00312Q9Y6C7 94 aa14.18□□□□□ -0.14
SYNE3-202ENST00000553340 COX11Q9Y6N1 276 aa14.18□□□□□ -0.14
SYNE3-202ENST00000553340 A0A1B0GXF2 115 aa14.18□□□□□ -0.14
SYNE3-202ENST00000553340 CORTO00230 105 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms