RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 RAB32Q13637 225 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 COMMD1Q8N668 190 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 ZNF491Q8N8L2 437 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 OR1P1Q8NH06 330 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 DTD1Q8TEA8 209 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 NARS2Q96I59 477 aaKnown RBP8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 OR4C12Q96R67 309 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 C12orf57Q99622 126 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 PDCD10Q9BUL8 212 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 RNF126Q9BV68 326 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 NMES1Q9C002 83 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 SAV1Q9H4B6 383 aaPredicted RBP8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 GNB4Q9HAV0 340 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 MLXQ9UH92 298 aa8.28□□□□□ -1.08
NPIPB3-210ENST00000542817 TRAV14DV4A0A0A6YYC5 116 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 PMS2P5A8MQ11 134 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 PRSS46E5RG02 174 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 I3L2K1 104 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 K7EIM0 57 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 OR2J3O76001 311 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 PF4V1P10720 104 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 IAPPP10997 89 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 SLC35B1P78383 322 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 RHOGP84095 191 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 MLANAQ16655 118 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 BPIFCQ8NFQ6 507 aa8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 FNDC4Q9H6D8 234 aaPredicted RBP8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 MRPL36Q9P0J6 103 aaKnown RBP8.27□□□□□ -1.09
NPIPB3-210ENST00000542817 NBEAL1Q6ZS30 2694 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 FAM74A7A6NL05 159 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 WRBO00258 174 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 BCL2L11O43521 198 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 SSSCA1O60232 199 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 SCGB1D2O95969 90 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 TRGV3P03979 118 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 S100A6P06703 90 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 SMIM6P0DI80 62 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 RPL23AP62750 156 aaKnown RBP8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 ERHP84090 104 aaKnown RBP8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 FAM74A3Q4VXF1 159 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 C2orf83Q53S99 150 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 ACOT7LQ6ZUV0 252 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 ZNF546Q86UE3 836 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 HAPLN4Q86UW8 402 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 SLC24A4Q8NFF2 622 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 STOML3Q8TAV4 291 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 PPP1R1CQ8WVI7 109 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 SMIM8Q96KF7 97 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 TCEAL7Q9BRU2 100 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 SEC11CQ9BY50 192 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 HEYLQ9NQ87 328 aaPredicted RBP8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 OR5AC2Q9NZP5 309 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 CACFD1Q9UGQ2 172 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 TNFSF18Q9UNG2 199 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 MGAM2Q2M2H8 2515 aa8.26□□□□□ -1.09
NPIPB3-210ENST00000542817 FXYD6-FXYD2A0A087WZ82 144 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 KANTRA0A1W2PQU2 76 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 PCP4L1A6NKN8 68 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 H3BP45 60 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 GATCO43716 136 aaKnown RBP8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 DEDDO75618 318 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 TRBV12-3P01733 135 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 CDX1P47902 265 aaPredicted RBP8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 TPPP2P59282 170 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 ARL16Q0P5N6 197 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 C15orf32Q32M92 178 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 RNF212Q495C1 297 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 TMEM14EPQ6UXP3 125 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 IL34Q6ZMJ4 242 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 NECAP1Q8NC96 275 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 OR4X2Q8NGF9 303 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 UBE2E2Q96LR5 201 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 CCDC140Q96MF4 163 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 ZFP57Q9NU63 452 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 FBXL7Q9UJT9 491 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 S4R3C0 116 aa8.25□□□□□ -1.09
NPIPB3-210ENST00000542817 IGHV3-21A0A0B4J1V1 117 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 TCRBV4S1A1TA0A5B7 111 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 NUPL2O15504 423 aaKnown RBP8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 MED6O75586 246 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 MT-CO2P00403 227 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 IGHV3-11P01762 117 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 IGHV3-48P01763 117 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 RLN2P04090 185 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 LYL1P12980 280 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 HIST1H1BP16401 226 aaKnown RBP8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 PVALBP20472 110 aaPredicted RBP8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 NPY1RP25929 384 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 TAS2R30P59541 319 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 CYCSP99999 105 aaKnown RBP8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 RUNX1Q01196 453 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 SLC25A24Q6NUK1 477 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 ZNF343Q6P1L6 599 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 ETV3LQ6ZN32 361 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 SPATA3Q8NHX4 192 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 ZNF502Q8TBZ5 544 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 RAB40CQ96S21 281 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 ZNF355PQ9NSJ1 428 aa8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 LSM5Q9Y4Y9 91 aaKnown RBP8.24□□□□□ -1.09
NPIPB3-210ENST00000542817 TSSC4Q9Y5U2 329 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 196 ms