RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 TEPPQ6URK8 271 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 BTNL8Q6UX41 500 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 EIF4E3Q8N5X7 224 aaKnown RBP6.74□□□□□ -1.33
VAPB-206ENST00000520497 ZNF114Q8NC26 417 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 PCNPQ8WW12 178 aaKnown RBP6.74□□□□□ -1.33
VAPB-206ENST00000520497 SSMEM1Q8WWF3 244 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 FAM210AQ96ND0 272 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 RASL11BQ9BPW5 248 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 HSPB9Q9BQS6 159 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 HRH4Q9H3N8 390 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 WDR83OSQ9Y284 106 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 MFSD2BA6NFX1 497 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 KRBOX1C9JBD0 128 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 M0QZK8 103 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 MT-CO2P00403 227 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 EGR2P11161 476 aaPredicted RBP6.73□□□□□ -1.33
VAPB-206ENST00000520497 SRP14P37108 136 aaKnown RBP6.73□□□□□ -1.33
VAPB-206ENST00000520497 TAGLN2P37802 199 aaKnown RBP6.73□□□□□ -1.33
VAPB-206ENST00000520497 OPRK1P41145 380 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 RUNX1Q01196 453 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 FFAR4Q5NUL3 377 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 SLC16A13Q7RTY0 426 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 CENPVQ7Z7K6 275 aaPredicted RBP6.73□□□□□ -1.33
VAPB-206ENST00000520497 SIGLECL1Q8N7X8 197 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 OR1P1Q8NH06 330 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 ARPC1AQ92747 370 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 RSG1Q9BU20 258 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 NPCDR1Q9BY65 106 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 VPREB3Q9UKI3 123 aa6.73□□□□□ -1.33
VAPB-206ENST00000520497 HOXA3O43365 443 aaPredicted RBP6.72□□□□□ -1.33
VAPB-206ENST00000520497 IGHG2P01859 326 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 FABP1P07148 127 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 DEFA4P12838 97 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 AREGP15514 252 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 PPT1P50897 306 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 CRIP2P52943 208 aaPredicted RBP6.72□□□□□ -1.33
VAPB-206ENST00000520497 ELLP55199 621 aaPredicted RBP6.72□□□□□ -1.33
VAPB-206ENST00000520497 CD69Q07108 199 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 PEA15Q15121 130 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 ASPHD1Q5U4P2 390 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 TMEM144Q7Z5S9 345 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 TMEM86BQ8N661 226 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 SGMS2Q8NHU3 365 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 NARS2Q96I59 477 aaKnown RBP6.72□□□□□ -1.33
VAPB-206ENST00000520497 P2RX4Q99571 388 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 FAM103A1Q9BTL3 118 aaKnown RBP6.72□□□□□ -1.33
VAPB-206ENST00000520497 ACTR3CQ9C0K3 210 aaPredicted RBP6.72□□□□□ -1.33
VAPB-206ENST00000520497 THYN1Q9P016 225 aa6.72□□□□□ -1.33
VAPB-206ENST00000520497 FBN1P35555 2871 aaKnown RBP6.71□□□□□ -1.33
VAPB-206ENST00000520497 CTXND1A0A1B0GTU2 59 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 A0A1W2PPV4 95 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 SH2D7A6NKC9 451 aaPredicted RBP6.71□□□□□ -1.34
VAPB-206ENST00000520497 NPIPB5A8MRT5 1133 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 J3QL48 77 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 ATP6V0E1O15342 81 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 REG1AP05451 166 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 CRYGCP07315 174 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 HIST1H1BP16401 226 aaKnown RBP6.71□□□□□ -1.34
VAPB-206ENST00000520497 CTRB1P17538 263 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 M6PRP20645 277 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 ZP3P21754 424 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 MFAP2P55001 183 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 SELENOTP62341 195 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 SCGB2A2Q13296 93 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 C19orf54Q5BKX5 351 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 CTRB2Q6GPI1 263 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 TTC9CQ8N5M4 171 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 SFT2D1Q8WV19 159 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 MISP3Q96FF7 219 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 TMEM68Q96MH6 324 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 RNF2Q99496 336 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 C19orf24Q9BVV8 132 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 SMDT1Q9H4I9 107 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 TREM1Q9NP99 234 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 SLC39A9Q9NUM3 307 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 ZNF580Q9UK33 172 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 CDC42EP3Q9UKI2 254 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 DMRT1Q9Y5R6 373 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 F11RQ9Y624 299 aaKnown RBP6.71□□□□□ -1.34
VAPB-206ENST00000520497 PXMP4Q9Y6I8 212 aa6.71□□□□□ -1.34
VAPB-206ENST00000520497 TRAV1-1A0A0B4J248 108 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 ANKRD34BA5PLL1 514 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 MAP1LC3B2A6NCE7 125 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 LINC01548A6NM66 108 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 AGPAT2O15120 278 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 IGF1P05019 195 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 APELAP0DMC3 54 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 SRD5A1P18405 259 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 MDKP21741 143 aaPredicted RBP6.7□□□□□ -1.34
VAPB-206ENST00000520497 RPL29P47914 159 aaKnown RBP6.7□□□□□ -1.34
VAPB-206ENST00000520497 CDC34P49427 236 aaPredicted RBP6.7□□□□□ -1.34
VAPB-206ENST00000520497 BLCAPP62952 87 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 KLK9Q2XQG4 91 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 AKIRIN2Q53H80 203 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 ARSJQ5FYB0 599 aaPredicted RBP6.7□□□□□ -1.34
VAPB-206ENST00000520497 Q6ZS46 218 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 C19orf35Q6ZS72 473 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 OR10G4Q8NGN3 311 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 OR10G9Q8NGN4 311 aa6.7□□□□□ -1.34
VAPB-206ENST00000520497 OR10G7Q8NGN6 311 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms