RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 LMX1AQ8TE12 382 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 APOBEC4Q8WW27 367 aaKnown RBP1.85□□□□□ -2.11
XRN1-211ENST00000477237 FGF11Q92914 225 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 MRPL24Q96A35 216 aaKnown RBP1.85□□□□□ -2.11
XRN1-211ENST00000477237 DNAJA3Q96EY1 480 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 IGF2BP2-AS1Q96M15 143 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 PITX2Q99697 317 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 TMEM147Q9BVK8 224 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 RERGLQ9H628 205 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 KCNIP2Q9NS61 270 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 TMEM100Q9NV29 134 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 ZNF257Q9Y2Q1 563 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 HEBP2Q9Y5Z4 205 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 CLTCQ00610 1675 aaKnown RBP1.85□□□□□ -2.11
XRN1-211ENST00000477237 PREX1Q8TCU6 1659 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 DENND4CQ5VZ89 1909 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 ALPK3Q96L96 1907 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 GPATCH8Q9UKJ3 1502 aaKnown RBP1.85□□□□□ -2.11
XRN1-211ENST00000477237 ARFGEF2Q9Y6D5 1785 aa1.85□□□□□ -2.11
XRN1-211ENST00000477237 EIF2AK4Q9P2K8 1649 aaKnown RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 KIF26AQ9ULI4 1882 aaPredicted RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 A0A087X0T9 212 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 A0A0A6YYD4 124 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 TRBV5-5A0A0J9YX44 114 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 LOC107986453A0A1B0GWG9 222 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 A0A1B0GXF2 115 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 C5orf49A4QMS7 147 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 IZUMO1RA6ND01 250 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 ARRDC5A6NEK1 342 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 TMEM235A6NFC5 223 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 RIIAD1A6NNX1 92 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 BBIP1A8MTZ0 92 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 TMEM262E9PQX1 116 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 GABARAPH6UMI1 98 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 AGPAT2O15120 278 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 KLF7O75840 302 aaPredicted RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 OR2A4O95047 310 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 CA2P00918 260 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 P01737 135 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 EIF4EP06730 217 aaKnown RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 HOXB7P09629 217 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 SLC25A6P12236 298 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 IFITM1P13164 125 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 NFYAP23511 347 aaPredicted RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 MYCNOSP40205 109 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 VDAC2P45880 294 aaPredicted RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 FOXA3P55318 350 aaPredicted RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 GFERP55789 205 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 C1QTNF8P60827 252 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 TMEM258P61165 79 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 ZNF85Q03923 595 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 DAZ2Q13117 558 aaKnown RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 EIF3IQ13347 325 aaKnown RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 MS4A13Q5J8X5 152 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 KLF17Q5JT82 389 aaPredicted RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 PAGE3Q5JUK9 113 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 BVES-AS1Q5T3Y7 98 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 C1orf189Q5VU69 101 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 FKBP1CQ5VVH2 108 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 ZNF57Q68EA5 555 aaPredicted RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 OR4C11Q6IEV9 310 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 Q6ZN92 141 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 Q6ZS92 163 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 H2AFVQ71UI9 128 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 DAZ4Q86SG3 579 aaKnown RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 PRR15Q8IV56 129 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 C1orf174Q8IYL3 243 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 C3orf22Q8N5N4 141 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 KLHDC1Q8N7A1 406 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 OR2T35Q8NGX2 323 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 OTOSQ8NHW6 89 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 NT5CQ8TCD5 201 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 TWIST2Q8WVJ9 160 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 KLK6Q92876 244 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 CNRIP1Q96F85 164 aaPredicted RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 FAM19A4Q96LR4 140 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 OR2A7Q96R45 310 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 RTL8AQ9BWD3 113 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 SPANXDQ9BXN6 97 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 PARLQ9H300 379 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 C16orf95Q9H693 158 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 TMEM9BQ9NQ34 198 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 DAZ1Q9NQZ3 744 aaKnown RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 DAZ3Q9NR90 486 aaKnown RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 TMEM106BQ9NUM4 274 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 NDUFB11Q9NX14 153 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 C21orf62Q9NYP8 219 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 ZNF581Q9P0T4 197 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 RBM12B-AS1Q9P1G2 102 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 IL36AQ9UHA7 158 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 ZNF222Q9UK12 451 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 NOP16Q9Y3C1 178 aaKnown RBP1.84□□□□□ -2.11
XRN1-211ENST00000477237 NEUROG3Q9Y4Z2 214 aa1.84□□□□□ -2.11
XRN1-211ENST00000477237 BTAF1O14981 1849 aa1.84□□□□□ -2.12
XRN1-211ENST00000477237 TMEM131Q92545 1883 aa1.84□□□□□ -2.12
XRN1-211ENST00000477237 C5P01031 1676 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 MYOM1P52179 1685 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 COL5A3P25940 1745 aaPredicted RBP1.83□□□□□ -2.12
XRN1-211ENST00000477237 PEAK1Q9H792 1746 aa1.83□□□□□ -2.12
XRN1-211ENST00000477237 FMN2Q9NZ56 1722 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms