RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 TMEM41BQ5BJD5 291 aa16.6■□□□□ 0.25
USP42-205ENST00000465073 METTL26Q96S19 204 aa16.6■□□□□ 0.25
USP42-205ENST00000465073 ENY2Q9NPA8 101 aa16.6■□□□□ 0.25
USP42-205ENST00000465073 KLK11Q9UBX7 282 aa16.6■□□□□ 0.25
USP42-205ENST00000465073 CRYBB3P26998 211 aa16.59■□□□□ 0.25
USP42-205ENST00000465073 RORCP51449 518 aa16.59■□□□□ 0.25
USP42-205ENST00000465073 TRIM16LQ309B1 348 aa16.59■□□□□ 0.25
USP42-205ENST00000465073 MZT2AQ6P582 158 aa16.59■□□□□ 0.25
USP42-205ENST00000465073 OR4X1Q8NH49 305 aa16.59■□□□□ 0.25
USP42-205ENST00000465073 GRAMD2BQ96HH9 432 aa16.59■□□□□ 0.25
USP42-205ENST00000465073 HRH4Q9H3N8 390 aa16.59■□□□□ 0.25
USP42-205ENST00000465073 K7EQG2 157 aa16.58■□□□□ 0.24
USP42-205ENST00000465073 CD3DP04234 171 aa16.58■□□□□ 0.24
USP42-205ENST00000465073 OPRK1P41145 380 aa16.58■□□□□ 0.24
USP42-205ENST00000465073 MORN3Q6PF18 240 aaPredicted RBP16.58■□□□□ 0.24
USP42-205ENST00000465073 Q8NAQ8 132 aa16.58■□□□□ 0.24
USP42-205ENST00000465073 STXBP6Q8NFX7 210 aa16.58■□□□□ 0.24
USP42-205ENST00000465073 ZFAND1Q8TCF1 268 aa16.58■□□□□ 0.24
USP42-205ENST00000465073 RRNAD1Q96FB5 475 aaKnown RBP16.58■□□□□ 0.24
USP42-205ENST00000465073 NARS2Q96I59 477 aaKnown RBP16.58■□□□□ 0.24
USP42-205ENST00000465073 FNDC4Q9H6D8 234 aaPredicted RBP16.58■□□□□ 0.24
USP42-205ENST00000465073 MRPL36Q9P0J6 103 aaKnown RBP16.58■□□□□ 0.24
USP42-205ENST00000465073 COPZ2Q9P299 210 aa16.58■□□□□ 0.24
USP42-205ENST00000465073 FAM25AB3EWG3 89 aa16.57■□□□□ 0.24
USP42-205ENST00000465073 FAM25CB3EWG5 89 aa16.57■□□□□ 0.24
USP42-205ENST00000465073 FAM25GB3EWG6 89 aa16.57■□□□□ 0.24
USP42-205ENST00000465073 C11orf94C9JXX5 98 aa16.57■□□□□ 0.24
USP42-205ENST00000465073 GIG44P09565 113 aaPredicted RBP16.57■□□□□ 0.24
USP42-205ENST00000465073 SPP1P10451 314 aa16.57■□□□□ 0.24
USP42-205ENST00000465073 P2RY1P47900 373 aa16.57■□□□□ 0.24
USP42-205ENST00000465073 RNASE12Q5GAN4 147 aaKnown RBP16.57■□□□□ 0.24
USP42-205ENST00000465073 TRPT1Q86TN4 253 aaKnown RBP16.57■□□□□ 0.24
USP42-205ENST00000465073 CCDC71LQ8N9Z2 235 aa16.57■□□□□ 0.24
USP42-205ENST00000465073 TMEM230Q96A57 120 aa16.57■□□□□ 0.24
USP42-205ENST00000465073 B3GALNT1O75752 331 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 UCP1P25874 307 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 PRR20EP86478 221 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 PRR20CP86479 221 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 PRR20DP86480 221 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 PRR20BP86481 221 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 PRR20AP86496 221 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 MLANAQ16655 118 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 BSXQ3C1V8 233 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 SP6Q3SY56 376 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 OR52I2Q8NH67 350 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 TERB2Q8NHR7 220 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 MTFP1Q9UDX5 166 aa16.56■□□□□ 0.24
USP42-205ENST00000465073 TRAV30A0A087WSZ9 112 aa16.55■□□□□ 0.24
USP42-205ENST00000465073 PPP5CP53041 499 aa16.55■□□□□ 0.24
USP42-205ENST00000465073 RNASE11Q8TAA1 199 aaKnown RBP16.55■□□□□ 0.24
USP42-205ENST00000465073 IGLL5B9A064 214 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 IGKV1-17P01599 117 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 MIFP14174 115 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 AP3S1Q92572 193 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 APLNQ9ULZ1 77 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 IGHV4-28A0A0C4DH34 117 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 A0A0G2JRQ6 117 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 RPS10-NUDT3A0A1W2PQS6 291 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 ZNF688P0C7X2 276 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 RBMY1A1P0DJD3 496 aaKnown RBP16.54■□□□□ 0.24
USP42-205ENST00000465073 RBMY1CP0DJD4 496 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 HTR2BP41595 481 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 EIF2B2P49770 351 aaKnown RBP16.54■□□□□ 0.24
USP42-205ENST00000465073 SPCS3P61009 180 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 RBMY1FQ15415 496 aaKnown RBP16.54■□□□□ 0.24
USP42-205ENST00000465073 AARDQ4LEZ3 155 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 FAM219AQ8IW50 185 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 OR13C8Q8NGS7 320 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 DCANP1Q8TF63 244 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 C15orf40Q8WUR7 153 aa16.54■□□□□ 0.24
USP42-205ENST00000465073 KNCNA6PVL3 124 aa16.53■□□□□ 0.24
USP42-205ENST00000465073 CD74P04233 296 aa16.53■□□□□ 0.24
USP42-205ENST00000465073 TIGITQ495A1 244 aa16.53■□□□□ 0.24
USP42-205ENST00000465073 Q6ZRM9 215 aa16.53■□□□□ 0.24
USP42-205ENST00000465073 TMEM229BQ8NBD8 167 aa16.53■□□□□ 0.24
USP42-205ENST00000465073 OR4D10Q8NGI6 311 aa16.53■□□□□ 0.24
USP42-205ENST00000465073 OR52E5Q8NH55 327 aa16.53■□□□□ 0.24
USP42-205ENST00000465073 KRTAP17-1Q9BYP8 105 aa16.53■□□□□ 0.24
USP42-205ENST00000465073 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.53■□□□□ 0.24
USP42-205ENST00000465073 EXTL2Q9UBQ6 330 aa16.53■□□□□ 0.24
USP42-205ENST00000465073 ZNF705EA8MWA4 302 aaPredicted RBP16.52■□□□□ 0.23
USP42-205ENST00000465073 ABHD1Q96SE0 405 aa16.52■□□□□ 0.23
USP42-205ENST00000465073 U3KQE9 123 aa16.52■□□□□ 0.23
USP42-205ENST00000465073 DNAH10Q8IVF4 4471 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 HELTA6NFD8 242 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 RAB3DO95716 219 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 ZNF182P17025 639 aaPredicted RBP16.51■□□□□ 0.23
USP42-205ENST00000465073 HLA-DMBP28068 263 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 TAS2R19P59542 299 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 SCGB2B2Q4G0G5 96 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 ACTL10Q5JWF8 245 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 CENPSQ8N2Z9 138 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 OR1S2Q8NGQ3 325 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 MARCH1Q8TCQ1 289 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 Q8WTZ3 238 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 TMEM222Q9H0R3 208 aa16.51■□□□□ 0.23
USP42-205ENST00000465073 CDS2O95674 445 aa16.5■□□□□ 0.23
USP42-205ENST00000465073 C4BPBP20851 252 aa16.5■□□□□ 0.23
USP42-205ENST00000465073 AP2S1P53680 142 aaPredicted RBP16.5■□□□□ 0.23
USP42-205ENST00000465073 HEYLQ9NQ87 328 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms