RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 BMI1P35226 326 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 HRH1P35367 487 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 CBX5P45973 191 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 ELLP55199 621 aaPredicted RBP3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 TAS2R20P59543 309 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 TSPAN5P62079 268 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 UBE2NLQ5JXB2 153 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 LAMTOR1Q6IAA8 161 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 CEMP1Q6PRD7 247 aaPredicted RBP3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 TBC1D26Q86UD7 250 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 SNX29P2Q8IUI4 249 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 RPP25LQ8N5L8 163 aaKnown RBP3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 TMEM116Q8NCL8 245 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 TMEM190Q8WZ59 177 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 LSM10Q969L4 123 aaKnown RBP3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 MARC2Q969Z3 335 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 PINX1Q96BK5 328 aaKnown RBP3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 RNF183Q96D59 192 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 YIPF6Q96EC8 236 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 BSCL2Q96G97 398 aaPredicted RBP3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 SEC22AQ96IW7 307 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 SPAG8Q99932 426 aaPredicted RBP3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 SRSF8Q9BRL6 282 aaKnown RBP3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 RHPN1-AS1Q9BWJ2 59 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 FXYD6Q9H0Q3 95 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 MAP6D1Q9H9H5 199 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 DAZ1Q9NQZ3 744 aaKnown RBP3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 COMMD9Q9P000 198 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 COMMD3Q9UBI1 195 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 SMPXQ9UHP9 88 aa3.45□□□□□ -1.86
GTF3C3-208ENST00000455546 TRAV14DV4A0A0A6YYC5 116 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 IGHV7-4-1A0A0J9YVY3 117 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 I3L2K1 104 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 K7EMT4 169 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 NUPL2O15504 423 aaKnown RBP3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 CYB5BO43169 146 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 HPGDSO60760 199 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 DEDDO75618 318 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 MT-CO2P00403 227 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 ELK1P19419 428 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 ETV6P41212 452 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 APOC4P55056 127 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 MFAP4P55083 255 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 TAS2R46P59540 309 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 NANOS2P60321 138 aaKnown RBP3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 VBP1P61758 197 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 NCS1P62166 190 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 SPSB3Q6PJ21 355 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 H2BFWTQ7Z2G1 175 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 HSD17B13Q7Z5P4 300 aaPredicted RBP3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 CMTM1Q8IZ96 169 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 OR1P1Q8NH06 330 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 OR4A16Q8NH70 328 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 GPX8Q8TED1 209 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 MRGPRFQ96AM1 343 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 TMEM56Q96MV1 263 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 CSTL1Q9H114 145 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 TMEM14BQ9NUH8 114 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 FKBP11Q9NYL4 201 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 PRNDQ9UKY0 176 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 ANAPC10Q9UM13 185 aa3.44□□□□□ -1.86
GTF3C3-208ENST00000455546 A0A0B4J293 547 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 KIR2DL5BA0A0G2JN68 375 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 KIR2DL5BA0A0G2JPC4 375 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 SMIM31A0A1B0GVY4 71 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 NUPR2A6NF83 97 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 OR4C46A6NHA9 309 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 C15orf61A6NNL5 157 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 C15orf62A8K5M9 175 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 UBE2CO00762 179 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 ST8SIA3O43173 380 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 GNG7O60262 68 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 DFFBO76075 338 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 TMEM50AO95807 157 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 PGAM2P15259 253 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 PPP5CP53041 499 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 DEFB131AP59861 70 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 HSPE1P61604 102 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 ERHP84090 104 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 SP6Q3SY56 376 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 KCTD21Q4G0X4 260 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 LEMD1Q68G75 181 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 THOC7Q6I9Y2 204 aaKnown RBP3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 LPCAT3Q6P1A2 487 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 TOMM20LQ6UXN7 152 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 TCF24Q7RTU0 167 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 CROCCP3Q8IVE0 287 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 KIR2DL5AQ8N109 375 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 FAM24BQ8N5W8 94 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 OR4D10Q8NGI6 311 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 OR11H2Q8NH07 326 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 KIR2DL5BQ8NHK3 375 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 PHLDA1Q8WV24 401 aaPredicted RBP3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 BORCS5Q969J3 196 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 GALNT14Q96FL9 552 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 OR10C1Q96KK4 312 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 TP53RKQ96S44 253 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 LYSTQ99698 3801 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 RARRES2Q99969 163 aa3.43□□□□□ -1.86
GTF3C3-208ENST00000455546 FUNDC2Q9BWH2 189 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms