RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 MIOXQ9UGB7 285 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 SLC45A2Q9UMX9 530 aa8.6□□□□□ -1.03
PKP4-206ENST00000452162 A0A1W2PN81 502 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 ARL14EPLP0DKL9 152 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 IGHV4-31P0DP07 118 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 CHRNA7P36544 502 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 PRRX1P54821 245 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 GAMTQ14353 236 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 ELOBQ15370 118 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 VMA21Q3ZAQ7 101 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 C10orf55Q5SWW7 151 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 ZNF343Q6P1L6 599 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 BEND2Q8NDZ0 799 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 ABHD5Q8WTS1 349 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 Q8WTZ3 238 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 RPUSD4Q96CM3 377 aaKnown RBP8.59□□□□□ -1.03
PKP4-206ENST00000452162 CLEC7AQ9BXN2 247 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 PARLQ9H300 379 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 TMEM242Q9NWH2 141 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 IGKV1OR2-108A0A075B7D4 117 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 C11orf94C9JXX5 98 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 CXorf1O96002 111 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 LGALS7P47929 136 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 WT1-ASQ06250 92 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 CD69Q07108 199 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 TMEM241Q24JQ0 296 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 TPSG1Q9NRR2 321 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 PPP1R14DQ9NXH3 145 aa8.59□□□□□ -1.03
PKP4-206ENST00000452162 IGHV3-72A0A0B4J1Y9 119 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 C22orf46C9J442 243 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 BUB1B-PAK6H3BSN5 160 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 SLC25A17O43808 307 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 IGHV2-5P01817 119 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 NPPCP23582 126 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 RND2P52198 227 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 RHOBP62745 196 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 ERHP84090 104 aaKnown RBP8.58□□□□□ -1.04
PKP4-206ENST00000452162 PRB3Q04118 309 aaPredicted RBP8.58□□□□□ -1.04
PKP4-206ENST00000452162 C21orf62-AS1Q17RA5 79 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 ZNF674Q2M3X9 581 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 SPATA31B1PQ5VZV4 182 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 C1QL4Q86Z23 238 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 IGHV1-3A0A0C4DH29 117 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 CRYGBP07316 175 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 CXCL1P09341 107 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 GPX4P36969 197 aaPredicted RBP8.58□□□□□ -1.04
PKP4-206ENST00000452162 ATP5G3P48201 142 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 RPL23P62829 140 aaKnown RBP8.58□□□□□ -1.04
PKP4-206ENST00000452162 MLANAQ16655 118 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 TEX45Q8NA69 505 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 OR4P4Q8NGL7 312 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 CACNG8Q8WXS5 425 aa8.58□□□□□ -1.04
PKP4-206ENST00000452162 SEPSECSQ9HD40 501 aaKnown RBP8.58□□□□□ -1.04
PKP4-206ENST00000452162 LY6LH3BQJ8 138 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 ENSAO43768 121 aaKnown RBP8.57□□□□□ -1.04
PKP4-206ENST00000452162 CD5LO43866 347 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 PDE6DO43924 150 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 LIPFP07098 398 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 COX7A1P24310 79 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 GCHFRP30047 84 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 UBE2G2P60604 165 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 CYB5R2Q6BCY4 276 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 SLC16A13Q7RTY0 426 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 SLC35E1Q96K37 410 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 CTDSP1Q9GZU7 261 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 LPAR2Q9HBW0 351 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 A0A1W2PPI3 338 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 CLDN34H7C241 214 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 OR10J1P30954 320 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 GNB1P62873 340 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 ADIRFQ15847 76 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 RNASEH2CQ8TDP1 164 aaKnown RBP8.57□□□□□ -1.04
PKP4-206ENST00000452162 SSX3Q99909 188 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 TXNDC17Q9BRA2 123 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 AMMECR1Q9Y4X0 333 aaPredicted RBP8.57□□□□□ -1.04
PKP4-206ENST00000452162 URGCP-MRPS24S4R325 110 aa8.57□□□□□ -1.04
PKP4-206ENST00000452162 TGIF2-C20orf24A0A0A6YYL0 155 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 F6UZH7 168 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 TGFAP01135 160 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 CNTFRP26992 372 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 PRSS8Q16651 343 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 CST9LP1Q5W188 147 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 PNKDQ8N490 385 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 LINC01356Q8N9X3 169 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 ONECUT1Q9UBC0 465 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 INSIG2Q9Y5U4 225 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 IGLC7A0M8Q6 106 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 VENTXO95231 258 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 PSG5Q15238 335 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 PVRIGQ6DKI7 326 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 MIR17HGQ75NE6 70 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 MMD2Q8IY49 270 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 OR51G1Q8NGK1 321 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 NANPQ8TBE9 248 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 FNDC4Q9H6D8 234 aaPredicted RBP8.56□□□□□ -1.04
PKP4-206ENST00000452162 YAE1D1Q9NRH1 226 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 FUT9Q9Y231 359 aa8.56□□□□□ -1.04
PKP4-206ENST00000452162 C5orf52A6NGY3 159 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 ZNF98A6NK75 572 aa8.55□□□□□ -1.04
PKP4-206ENST00000452162 B4DSR2 109 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms