RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 PECRQ9BY49 303 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 LINC00470Q9BZP3 86 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 OR2H1Q9GZK4 316 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 METTL9Q9H1A3 318 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 ZNF442Q9H7R0 627 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 PSG11Q9UQ72 335 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 NINQ8N4C6 2090 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 NOTCH3Q9UM47 2321 aa3.03□□□□□ -1.92
HMGB3P18-201ENST00000406327 NUP210LQ5VU65 1888 aa3.03□□□□□ -1.93
HMGB3P18-201ENST00000406327 TET2Q6N021 2002 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 THADAQ6YHU6 1953 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 PCDH15Q96QU1 1955 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 FXYD6-FXYD2A0A087WZ82 144 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 A0A0D9SG52 128 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 IGHV7-4-1A0A0J9YVY3 117 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR5H14A6NHG9 310 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 KLRC4-KLRK1H3BQV0 150 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 M0R1B8 84 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 RRP8O43159 456 aaKnown RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 RBFOX2O43251 390 aaKnown RBP eCLIP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 TNFSF15O95150 251 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 TRBV12-3P01733 135 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 LIPCP11150 499 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 SLC25A4P12235 298 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF708P17019 499 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 AKR1C4P17516 323 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 BLVRBP30043 206 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 RBP2P50120 134 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 TAS2R31P59538 309 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 FAM3AP98173 230 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 SURF2Q15527 256 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR8B8Q15620 311 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 TMEM128Q5BJH2 165 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 PABPC1L2AQ5JQF8 200 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 Q6ZR03 302 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 WDR86Q86TI4 376 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 LHFPL1Q86WI0 220 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 TMEM256Q8N2U0 113 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 KCNRGQ8N5I3 272 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 TMEM251Q8N6I4 163 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 PXT1Q8NFP0 134 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR5D18Q8NGL1 313 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR5H2Q8NGV7 314 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR6K3Q8NGY3 331 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR13G1Q8NGZ3 307 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 ANGPTL6Q8NI99 470 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 MRPS24Q96EL2 167 aaKnown RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF414Q96IQ9 312 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 KCNS1Q96KK3 526 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 S100A13Q99584 98 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 PHB2Q99623 299 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 RTBDNQ9BSG5 229 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 TTTY12Q9BZ98 90 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 FGF23Q9GZV9 251 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 ARL6Q9H0F7 186 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 FXYD6Q9H0Q3 95 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 RNF122Q9H9V4 155 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 TREM1Q9NP99 234 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 PLEKHJ1Q9NW61 149 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 MED9Q9NWA0 146 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 COMMD9Q9P000 198 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF230Q9UIE0 474 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 ATPIF1Q9UII2 106 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 KLK12Q9UKR0 248 aa3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 MCTS1Q9ULC4 181 aaKnown RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 KLF13Q9Y2Y9 288 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 NOSIPQ9Y314 301 aaKnown RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 NOP16Q9Y3C1 178 aaKnown RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 COL5A1P20908 1838 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P18-201ENST00000406327 ARHGAP21Q5T5U3 1957 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 IGKV1-27A0A075B6S5 117 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 TRBV6-7A0A0A0MS04 114 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 TRAV8-6A0A0B4J262 113 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 IGKV1-12A0A0C4DH73 117 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 FAM240AA0A1B0GVK7 77 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR5H1A6NKK0 313 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 EEF1E1-BLOC1S5C9J1V9 151 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 SDCBPO00560 298 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 SFT2D2O95562 160 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 CST4P01036 141 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 IGKV1D-12P01611 117 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 NMBP08949 121 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 COX5BP10606 129 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 PSMB6P28072 239 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 PMELP40967 661 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 AP2S1P53680 142 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 PLGLB1Q02325 96 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 OR2F1Q13607 317 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF345Q14585 488 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 RSU1Q15404 277 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 TAF9Q16594 264 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 C6orf99Q4VX62 202 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 HES3Q5TGS1 186 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 AADACL3Q5VUY0 350 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZNF660Q6AZW8 331 aaPredicted RBP3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 Q6P435 159 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 ALKAL2Q6UX46 152 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 CLEC18BQ6UXF7 455 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 ZFP2Q6ZN57 461 aa3.01□□□□□ -1.93
HMGB3P18-201ENST00000406327 C6orf201Q7Z4U5 140 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms