RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FAM90A15PP0C7V4 464 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 FAM90A13PP0C7W8 464 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 FAM90A14PP0C7W9 464 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 FAM90A24PP0C7X0 464 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 CXorf66Q5JRM2 361 aaPredicted RBP5.25□□□□□ -1.57
VCAN-203ENST00000343200 DTX1Q86Y01 620 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 JMJD8Q96S16 334 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 DUSP15Q9H1R2 295 aaPredicted RBP5.25□□□□□ -1.57
VCAN-203ENST00000343200 CENPEQ02224 2701 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 TRAV13-1A0A0B4J241 112 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 A0A1W2PPC1 479 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 DRD3P35462 400 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 TMEM91Q6ZNR0 172 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 RAX2Q96IS3 184 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 LHX9Q9NQ69 397 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 OSTCQ9NRP0 149 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 TRAV8-3A0A0A6YYJ7 113 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 IGKV3OR2-268A0A0C4DH90 116 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 IFNL4K9M1U5 179 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 GUSBP11Q6P575 273 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 COL11A2P13942 1736 aaPredicted RBP5.25□□□□□ -1.57
VCAN-203ENST00000343200 IGKV3-7A0A075B6H7 116 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 FAM231BA6NCW3 169 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 ACYP1P07311 99 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 RPL23P62829 140 aaKnown RBP5.25□□□□□ -1.57
VCAN-203ENST00000343200 MRPS21P82921 87 aaKnown RBP5.25□□□□□ -1.57
VCAN-203ENST00000343200 CCL17Q92583 94 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 AGMATQ9BSE5 352 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 MRPS18AQ9NVS2 196 aaKnown RBP5.25□□□□□ -1.57
VCAN-203ENST00000343200 FZR1Q9UM11 496 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 SRFP11831 508 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 PDCD1Q15116 288 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 Q5BKY6 102 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 MSRB3Q8IXL7 192 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 MYEOVQ96EZ4 313 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 ASCL2Q99929 193 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 NPIPB11E5RHQ5 1161 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 H3BTX0 84 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 ATP5G1P05496 136 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 ATP5G3P48201 142 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 ATP5G2Q06055 141 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 TMEM30BQ3MIR4 351 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 PLEKHB2Q96CS7 222 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 FASNP49327 2511 aaKnown RBP5.25□□□□□ -1.57
VCAN-203ENST00000343200 ZNHIT1O43257 154 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 IL18BPO95998 194 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 MPZP25189 248 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 HSF5Q4G112 596 aaPredicted RBP5.25□□□□□ -1.57
VCAN-203ENST00000343200 TOMM7Q9P0U1 55 aa5.25□□□□□ -1.57
VCAN-203ENST00000343200 ZGLP1P0C6A0 271 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 RPL27AP46776 148 aaKnown RBP5.24□□□□□ -1.57
VCAN-203ENST00000343200 FOXG1P55316 489 aaPredicted RBP5.24□□□□□ -1.57
VCAN-203ENST00000343200 WFDC3Q8IUB2 231 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 SAXO1Q8IYX7 474 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 TSKUQ8WUA8 353 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 NOTCH2Q04721 2471 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 BPTFQ12830 3046 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 COX7A1P24310 79 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 PGFP49763 221 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 DUX4L9Q6RFH8 374 aaPredicted RBP5.24□□□□□ -1.57
VCAN-203ENST00000343200 C6orf15Q6UXA7 325 aaPredicted RBP5.24□□□□□ -1.57
VCAN-203ENST00000343200 SNHG12Q9BXW3 62 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 F8VVB4 439 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 F8VWA3 439 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 EREGO14944 169 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 CCL20P78556 96 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 SPRYD7Q5W111 196 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 ACRP10323 421 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 HLA-DMBP28068 263 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 TSPAN7P41732 249 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 FGFRL1Q8N441 504 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 IGKV3D-15A0A087WSY6 115 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 MMP23AO75900 390 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 CGAP01215 116 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 IGKV3-15P01624 115 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 FAM106CPP0CH98 169 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 OR5P3Q8WZ94 311 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 PDLIM7Q9NR12 457 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 CD28P10747 220 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 IGFBP2P18065 325 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 CXCL12P48061 93 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 C3AR1Q16581 482 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 FAM57AQ8TBR7 257 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 CRIM1Q9NZV1 1036 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 TRAV24A0A0B4J272 114 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 MFRPQ9BY79 579 aa5.24□□□□□ -1.57
VCAN-203ENST00000343200 CD200R1LQ6Q8B3 271 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 PCSK4Q6UW60 755 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 LINC00615Q96LM1 132 aaPredicted RBP5.23□□□□□ -1.57
VCAN-203ENST00000343200 TBC1D29Q9UFV1 150 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 KLHDC2Q9Y2U9 406 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 U3KQE9 123 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 SMAD7O15105 426 aaKnown RBP5.23□□□□□ -1.57
VCAN-203ENST00000343200 TDGF1P13385 188 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 TMEM187Q14656 261 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 ABHD12Q8N2K0 398 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 Q9H3A6 140 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 IGKV1D-42A0A075B6H8 117 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 ZNF83P51522 516 aa5.23□□□□□ -1.57
VCAN-203ENST00000343200 FGF12P61328 243 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms