RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 GDF5OSQ5U4N7 250 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 OR2T6Q8NHC8 308 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 CCL13Q99616 98 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 ZNRD1Q9P1U0 126 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 PEX7O00628 323 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 OR2J3O76001 311 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 ERHP84090 104 aaKnown RBP15.48■□□□□ 0.07
RTN4-201ENST00000317610 PMCHL1Q16048 86 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 TBR1Q16650 682 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 Q6ZN92 141 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 FAM216BQ8N7L0 139 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 NUP35Q8NFH5 326 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 LAMTOR2Q9Y2Q5 125 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 HNRNPA3P51991 378 aaKnown RBP15.47■□□□□ 0.07
RTN4-201ENST00000317610 VHLLQ6RSH7 139 aa15.47■□□□□ 0.07
RTN4-201ENST00000317610 STPG4Q8N801 248 aa15.47■□□□□ 0.07
RTN4-201ENST00000317610 NUDT10Q8NFP7 164 aa15.47■□□□□ 0.07
RTN4-201ENST00000317610 OR1L4Q8NGR5 311 aa15.47■□□□□ 0.07
RTN4-201ENST00000317610 NUDT11Q96G61 164 aa15.47■□□□□ 0.07
RTN4-201ENST00000317610 TXN2Q99757 166 aa15.47■□□□□ 0.07
RTN4-201ENST00000317610 PAXXQ9BUH6 204 aa15.47■□□□□ 0.07
RTN4-201ENST00000317610 CLEC7AQ9BXN2 247 aa15.47■□□□□ 0.07
RTN4-201ENST00000317610 C7orf69Q9H7B7 122 aa15.47■□□□□ 0.07
RTN4-201ENST00000317610 ZNF355PQ9NSJ1 428 aa15.47■□□□□ 0.07
RTN4-201ENST00000317610 FSTL3O95633 263 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 IGHV1-46P01743 117 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 NTF3P20783 257 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 MFAP2P55001 183 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 TNFAIP6P98066 277 aaPredicted RBP15.46■□□□□ 0.07
RTN4-201ENST00000317610 SNRNP40Q96DI7 357 aaKnown RBP15.46■□□□□ 0.07
RTN4-201ENST00000317610 CHRDL1Q9BU40 450 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 MRPL20Q9BYC9 149 aaKnown RBP15.46■□□□□ 0.07
RTN4-201ENST00000317610 WNT10AQ9GZT5 417 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 WDFY4Q6ZS81 3184 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 COX7A2P2O60397 106 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 NDUFB8O95169 186 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 PYYP10082 97 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 MYCNOSP40205 109 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 RPL8P62917 257 aaKnown RBP15.46■□□□□ 0.07
RTN4-201ENST00000317610 SSBP2P81877 361 aaPredicted RBP15.46■□□□□ 0.07
RTN4-201ENST00000317610 TNXAQ16473 311 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 TMEM177Q53S58 311 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 PATE2Q6UY27 113 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 DEFB108BQ8NET1 73 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 HARBI1Q96MB7 349 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 ZNF430Q9H8G1 570 aaPredicted RBP15.46■□□□□ 0.07
RTN4-201ENST00000317610 DCAF16Q9NXF7 216 aa15.46■□□□□ 0.07
RTN4-201ENST00000317610 hADV38S2A0JD32 116 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 H0YJW9 148 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 APOA2P02652 100 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 SRSF6Q13247 344 aaKnown RBP15.45■□□□□ 0.06
RTN4-201ENST00000317610 TEX36Q5VZQ5 186 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 C10orf113Q5VZT2 155 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 ZNF474Q6S9Z5 364 aaPredicted RBP15.45■□□□□ 0.06
RTN4-201ENST00000317610 C11orf42Q8N5U0 333 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 OR5AN1Q8NGI8 311 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 RND1Q92730 232 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 FXYD5Q96DB9 178 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 SAP30LQ9HAJ7 183 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 LINC00312Q9Y6C7 94 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 NBEAQ8NFP9 2946 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 A0A1W2PN81 502 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 ALKBH2Q6NS38 261 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 THAP8Q8NA92 274 aa15.45■□□□□ 0.06
RTN4-201ENST00000317610 ALKBH7Q9BT30 221 aaPredicted RBP15.45■□□□□ 0.06
RTN4-201ENST00000317610 FNDC4Q9H6D8 234 aaPredicted RBP15.45■□□□□ 0.06
RTN4-201ENST00000317610 MRPS16Q9Y3D3 137 aaKnown RBP15.45■□□□□ 0.06
RTN4-201ENST00000317610 IGKV1D-37A0A075B6S9 117 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 TCRBV4S1A1TA0A5B7 111 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 E7EUB6 86 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 BPIFB3P59826 476 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 ATP5L2Q7Z4Y8 100 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 OR8B3Q8NGG8 313 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 OR4A5Q8NH83 315 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 TMEM167AQ8TBQ9 72 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 OR8B2Q96RD0 313 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 CADP27708 2225 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 C20orf202A1L168 122 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 FAM181BA6NEQ2 426 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 SIAH2O43255 324 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 ASPHD1Q5U4P2 390 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 TNFRSF19Q9NS68 423 aa15.44■□□□□ 0.06
RTN4-201ENST00000317610 TRAV34A0A0B4J273 112 aa15.43■□□□□ 0.06
RTN4-201ENST00000317610 A0A1B0GXF2 115 aa15.43■□□□□ 0.06
RTN4-201ENST00000317610 CGB1A6NKQ9 187 aa15.43■□□□□ 0.06
RTN4-201ENST00000317610 DMRTA1Q5VZB9 504 aa15.43■□□□□ 0.06
RTN4-201ENST00000317610 SMIM12Q96EX1 92 aa15.43■□□□□ 0.06
RTN4-201ENST00000317610 HSBP1O75506 76 aa15.43■□□□□ 0.06
RTN4-201ENST00000317610 HIST1H1EP10412 219 aaKnown RBP15.43■□□□□ 0.06
RTN4-201ENST00000317610 TSPOP30536 169 aa15.43■□□□□ 0.06
RTN4-201ENST00000317610 LCN12Q6JVE5 192 aa15.43■□□□□ 0.06
RTN4-201ENST00000317610 EBLN2Q6P2I7 272 aa15.43■□□□□ 0.06
RTN4-201ENST00000317610 PPIAL4AQ9Y536 164 aa15.43■□□□□ 0.06
RTN4-201ENST00000317610 TRAV9-2A0A087WT02 112 aa15.42■□□□□ 0.06
RTN4-201ENST00000317610 WT1-ASQ06250 92 aa15.42■□□□□ 0.06
RTN4-201ENST00000317610 ZNF841Q6ZN19 808 aa15.42■□□□□ 0.06
RTN4-201ENST00000317610 ORAOV1Q8WV07 137 aa15.42■□□□□ 0.06
RTN4-201ENST00000317610 GAL3ST2Q9H3Q3 398 aa15.42■□□□□ 0.06
RTN4-201ENST00000317610 NPIPB3Q92617 1050 aa15.42■□□□□ 0.06
RTN4-201ENST00000317610 IGHV2-26A0A0B4J1V2 119 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms