RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 SMIM8Q96KF7 97 aa12.58□□□□□ -0.39
NPM1-201ENST00000296930 NDUFA4L2Q9NRX3 87 aa12.58□□□□□ -0.39
NPM1-201ENST00000296930 LYRM2Q9NU23 88 aaPredicted RBP12.58□□□□□ -0.39
NPM1-201ENST00000296930 SMAD5-AS1Q9Y6J3 95 aa12.58□□□□□ -0.39
NPM1-201ENST00000296930 MAS1LP35410 378 aa12.58□□□□□ -0.4
NPM1-201ENST00000296930 AP2S1P53680 142 aaPredicted RBP12.58□□□□□ -0.4
NPM1-201ENST00000296930 TAS2R30P59541 319 aa12.58□□□□□ -0.4
NPM1-201ENST00000296930 TNXAQ16473 311 aa12.58□□□□□ -0.4
NPM1-201ENST00000296930 INO80EQ8NBZ0 244 aaPredicted RBP12.58□□□□□ -0.4
NPM1-201ENST00000296930 TMEM68Q96MH6 324 aa12.58□□□□□ -0.4
NPM1-201ENST00000296930 ZNF355PQ9NSJ1 428 aa12.58□□□□□ -0.4
NPM1-201ENST00000296930 FAM24AA6NFZ4 105 aa12.57□□□□□ -0.4
NPM1-201ENST00000296930 RPL12P30050 165 aaKnown RBP12.57□□□□□ -0.4
NPM1-201ENST00000296930 CAV2P51636 162 aa12.57□□□□□ -0.4
NPM1-201ENST00000296930 OR2F1Q13607 317 aa12.57□□□□□ -0.4
NPM1-201ENST00000296930 CIB3Q96Q77 187 aaPredicted RBP12.57□□□□□ -0.4
NPM1-201ENST00000296930 HINT2Q9BX68 163 aa12.57□□□□□ -0.4
NPM1-201ENST00000296930 PSENENQ9NZ42 101 aa12.57□□□□□ -0.4
NPM1-201ENST00000296930 A0A0G2JLM5 398 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 IGSF23A1L1A6 192 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 TSC22D2O75157 780 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 HOXA1P49639 335 aaPredicted RBP12.56□□□□□ -0.4
NPM1-201ENST00000296930 KCNRGQ8N5I3 272 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 TMEM252Q8N6L7 170 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 OR5T1Q8NG75 326 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 OR10W1Q8NGF6 305 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 OR4C12Q96R67 309 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 STAB2Q8WWQ8 2551 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 ACTL6BO94805 426 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 RPL27AP46776 148 aaKnown RBP12.56□□□□□ -0.4
NPM1-201ENST00000296930 SPANXN5Q5MJ07 72 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 ASCL2Q99929 193 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 PLEKHA3Q9HB20 300 aa12.56□□□□□ -0.4
NPM1-201ENST00000296930 A0A0D9SG52 128 aa12.55□□□□□ -0.4
NPM1-201ENST00000296930 ZP3P21754 424 aa12.55□□□□□ -0.4
NPM1-201ENST00000296930 NUP62P37198 522 aaPredicted RBP12.55□□□□□ -0.4
NPM1-201ENST00000296930 EWSR1Q01844 656 aaKnown RBP eCLIP12.55□□□□□ -0.41e-7■■■■■ 34.1
NPM1-201ENST00000296930 TMUB2Q71RG4 321 aa12.55□□□□□ -0.4
NPM1-201ENST00000296930 SRSF12Q8WXF0 261 aaKnown RBP12.55□□□□□ -0.4
NPM1-201ENST00000296930 ELOVL1Q9BW60 279 aa12.55□□□□□ -0.4
NPM1-201ENST00000296930 ARL6Q9H0F7 186 aa12.55□□□□□ -0.4
NPM1-201ENST00000296930 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
NPM1-201ENST00000296930 INS-IGF2F8WCM5 200 aa12.54□□□□□ -0.4
NPM1-201ENST00000296930 BRI3O95415 125 aa12.54□□□□□ -0.4
NPM1-201ENST00000296930 GP9P14770 177 aa12.54□□□□□ -0.4
NPM1-201ENST00000296930 S100A11P31949 105 aa12.54□□□□□ -0.4
NPM1-201ENST00000296930 NHLH2Q02577 135 aa12.54□□□□□ -0.4
NPM1-201ENST00000296930 TMEM14EPQ6UXP3 125 aa12.54□□□□□ -0.4
NPM1-201ENST00000296930 BSCL2Q96G97 398 aaPredicted RBP12.54□□□□□ -0.4
NPM1-201ENST00000296930 HIPK2Q9H2X6 1198 aa12.54□□□□□ -0.4
NPM1-201ENST00000296930 KMT2CQ8NEZ4 4911 aaKnown RBP12.54□□□□□ -0.4
NPM1-201ENST00000296930 IGLC7A0M8Q6 106 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 C15orf62A8K5M9 175 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 TEX22C9J3V5 150 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 WT1-ASQ06250 92 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 TMEM170AQ8WVE7 144 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 SLC25A31Q9H0C2 315 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 ENY2Q9NPA8 101 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 CST7O76096 145 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 METTL15P1P0C7V9 234 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 OPCMLQ14982 345 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 BSXQ3C1V8 233 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 HAPLN4Q86UW8 402 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 ZC4H2Q9NQZ6 224 aa12.53□□□□□ -0.4
NPM1-201ENST00000296930 STRAPQ9Y3F4 350 aaKnown RBP12.53□□□□□ -0.4
NPM1-201ENST00000296930 PMS2P5A8MQ11 134 aa12.52□□□□□ -0.41
NPM1-201ENST00000296930 SULT1A1P50225 295 aa12.52□□□□□ -0.41
NPM1-201ENST00000296930 BAXQ07812 192 aa12.52□□□□□ -0.41
NPM1-201ENST00000296930 SLC24A4Q8NFF2 622 aa12.52□□□□□ -0.41
NPM1-201ENST00000296930 FBXL17Q9UF56 701 aa12.52□□□□□ -0.41
NPM1-201ENST00000296930 U3KQ87 197 aa12.52□□□□□ -0.41
NPM1-201ENST00000296930 ANKRD34BA5PLL1 514 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 BCL2L11O43521 198 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 IFNA10P01566 189 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 AREGP15514 252 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 ARL16Q0P5N6 197 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 STX12Q86Y82 276 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 USMG5Q96IX5 58 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 APELAP0DMC3 54 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 OR13C7P0DN81 318 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 RNASE2P10153 161 aaKnown RBP12.51□□□□□ -0.41
NPM1-201ENST00000296930 NPY1RP25929 384 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 KLF5Q13887 457 aaPredicted RBP12.51□□□□□ -0.41
NPM1-201ENST00000296930 TMEM217Q8N7C4 229 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 SMIM3Q9BZL3 60 aa12.51□□□□□ -0.41
NPM1-201ENST00000296930 PAIP2BQ9ULR5 123 aaKnown RBP12.51□□□□□ -0.41
NPM1-201ENST00000296930 KANTRA0A1W2PQU2 76 aa12.5□□□□□ -0.41
NPM1-201ENST00000296930 IGLV1-51P01701 117 aa12.5□□□□□ -0.41
NPM1-201ENST00000296930 HTR2BP41595 481 aa12.5□□□□□ -0.41
NPM1-201ENST00000296930 ERHP84090 104 aaKnown RBP12.5□□□□□ -0.41
NPM1-201ENST00000296930 ZNF343Q6P1L6 599 aa12.5□□□□□ -0.41
NPM1-201ENST00000296930 SBSPONQ8IVN8 264 aa12.5□□□□□ -0.41
NPM1-201ENST00000296930 OR5C1Q8NGR4 320 aa12.5□□□□□ -0.41
NPM1-201ENST00000296930 ARPC5LQ9BPX5 153 aa12.5□□□□□ -0.41
NPM1-201ENST00000296930 SRSF8Q9BRL6 282 aaKnown RBP12.5□□□□□ -0.41
NPM1-201ENST00000296930 CYTL1Q9NRR1 136 aa12.5□□□□□ -0.41
NPM1-201ENST00000296930 PEF1Q9UBV8 284 aaKnown RBP12.5□□□□□ -0.41
NPM1-201ENST00000296930 REG1AP05451 166 aa12.49□□□□□ -0.41
NPM1-201ENST00000296930 FRMD6-AS1P0C7T7 363 aa12.49□□□□□ -0.41
NPM1-201ENST00000296930 C4BPBP20851 252 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms