RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 SCRT1Q9BWW7 348 aa9.97□□□□□ -0.81
CLPTM1-208ENST00000588274 KRTAP4-5Q9BYR2 181 aa9.97□□□□□ -0.81
CLPTM1-208ENST00000588274 DFFBO76075 338 aa9.96□□□□□ -0.82
CLPTM1-208ENST00000588274 MT-CO2P00403 227 aa9.96□□□□□ -0.82
CLPTM1-208ENST00000588274 AMBPP02760 352 aa9.96□□□□□ -0.82
CLPTM1-208ENST00000588274 GABARAPL2P60520 117 aa9.96□□□□□ -0.82
CLPTM1-208ENST00000588274 SPARTQ8N0X7 666 aa9.96□□□□□ -0.82
CLPTM1-208ENST00000588274 CSNK1G2-AS1Q8NCQ2 148 aa9.96□□□□□ -0.82
CLPTM1-208ENST00000588274 SEC22AQ96IW7 307 aa9.96□□□□□ -0.82
CLPTM1-208ENST00000588274 CNBD2Q96M20 576 aa9.96□□□□□ -0.82
CLPTM1-208ENST00000588274 PRNDQ9UKY0 176 aa9.96□□□□□ -0.82
CLPTM1-208ENST00000588274 CELA1Q9UNI1 258 aa9.96□□□□□ -0.82
CLPTM1-208ENST00000588274 AGRNO00468 2067 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 LRP1BQ9NZR2 4599 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 IGHV3-66A0A0C4DH42 116 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 A0A1B0GU03 582 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 XRCC3O43542 346 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 YIF1AO95070 293 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 MIFP14174 115 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 NAT1P18440 290 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 RFX2P48378 723 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 MFAP4P55083 255 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 PRCDQ00LT1 54 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 PVRIGQ6DKI7 326 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 IZUMO2Q6UXV1 221 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 MISP3Q96FF7 219 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 TMEM56Q96MV1 263 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 ZNF2Q9BSG1 426 aaPredicted RBP9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 EHFQ9NZC4 300 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 BLOC1S6Q9UL45 172 aa9.95□□□□□ -0.82
CLPTM1-208ENST00000588274 TRAV10A0A0B4J240 114 aa9.94□□□□□ -0.82
CLPTM1-208ENST00000588274 K7EQG2 157 aa9.94□□□□□ -0.82
CLPTM1-208ENST00000588274 PSMB9P28065 219 aa9.94□□□□□ -0.82
CLPTM1-208ENST00000588274 CBX5P45973 191 aa9.94□□□□□ -0.82
CLPTM1-208ENST00000588274 HERV-K104P61576 105 aa9.94□□□□□ -0.82
CLPTM1-208ENST00000588274 MXD1Q05195 221 aa9.94□□□□□ -0.82
CLPTM1-208ENST00000588274 RNF126Q9BV68 326 aa9.94□□□□□ -0.82
CLPTM1-208ENST00000588274 MRPL36Q9P0J6 103 aaKnown RBP9.94□□□□□ -0.82
CLPTM1-208ENST00000588274 MUC4Q99102 2169 aa9.94□□□□□ -0.82
CLPTM1-208ENST00000588274 ST8SIA3O43173 380 aa9.93□□□□□ -0.82
CLPTM1-208ENST00000588274 CD5P06127 495 aa9.93□□□□□ -0.82
CLPTM1-208ENST00000588274 DCANP1Q8TF63 244 aa9.93□□□□□ -0.82
CLPTM1-208ENST00000588274 BORCS5Q969J3 196 aa9.93□□□□□ -0.82
CLPTM1-208ENST00000588274 CMTM3Q96MX0 182 aa9.93□□□□□ -0.82
CLPTM1-208ENST00000588274 FAM212BQ9NTI7 297 aaPredicted RBP9.93□□□□□ -0.82
CLPTM1-208ENST00000588274 FKBP11Q9NYL4 201 aa9.93□□□□□ -0.82
CLPTM1-208ENST00000588274 PUS1Q9Y606 427 aaKnown RBP eCLIP9.93□□□□□ -0.82
CLPTM1-208ENST00000588274 GPR31O00270 319 aa9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 GNG7O60262 68 aa9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 SNAPC5O75971 98 aa9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 PAFAH1B2P68402 229 aa9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 C12orf74Q32Q52 190 aa9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 IDNKQ5T6J7 187 aa9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 LYSMD2Q8IV50 215 aa9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 GRAMD2BQ96HH9 432 aa9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 TSC22D3Q99576 134 aa9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 GINS3Q9BRX5 216 aa9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 SSR3Q9UNL2 185 aa9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 APOBP04114 4563 aaKnown RBP9.92□□□□□ -0.82
CLPTM1-208ENST00000588274 PRSS29PA6NIE9 313 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 KNCNA6PVL3 124 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 INS-IGF2F8WCM5 200 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 PMP2P02689 132 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 P0C879 139 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 SPP1P10451 314 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 IZUMO4Q1ZYL8 232 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 TMEM41BQ5BJD5 291 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 ZNF600Q6ZNG1 722 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 STHQ8IWL8 128 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 POM121L12Q8N7R1 296 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 FCGR1BQ92637 280 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 PINX1Q96BK5 328 aaKnown RBP9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 FNDC4Q9H6D8 234 aaPredicted RBP9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 CLEC5AQ9NY25 188 aa9.91□□□□□ -0.82
CLPTM1-208ENST00000588274 TMEM50AO95807 157 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 ZNF688P0C7X2 276 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 CRYBB3P26998 211 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 TGFBR1P36897 503 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 HSPA13P48723 471 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 HSPE1P61604 102 aaKnown RBP9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 PHLDA2Q53GA4 152 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 MORN3Q6PF18 240 aaPredicted RBP9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 Q6ZR54 194 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 ZNF767PQ75MW2 155 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 TBC1D26Q86UD7 250 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 CMTM1Q8IZ96 169 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 MRGPRFQ96AM1 343 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 IFT46Q9NQC8 304 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 DIABLOQ9NR28 239 aa9.9□□□□□ -0.82
CLPTM1-208ENST00000588274 DNASE2O00115 360 aaPredicted RBP9.89□□□□□ -0.83
CLPTM1-208ENST00000588274 IGKV1-5P01602 117 aa9.89□□□□□ -0.83
CLPTM1-208ENST00000588274 CD74P04233 296 aa9.89□□□□□ -0.83
CLPTM1-208ENST00000588274 HRH1P35367 487 aa9.89□□□□□ -0.83
CLPTM1-208ENST00000588274 PPP5CP53041 499 aa9.89□□□□□ -0.83
CLPTM1-208ENST00000588274 TAS2R20P59543 309 aa9.89□□□□□ -0.83
CLPTM1-208ENST00000588274 SPINK9Q5DT21 86 aa9.89□□□□□ -0.83
CLPTM1-208ENST00000588274 DUSP18Q8NEJ0 188 aa9.89□□□□□ -0.83
CLPTM1-208ENST00000588274 OR5H2Q8NGV7 314 aa9.89□□□□□ -0.83
CLPTM1-208ENST00000588274 RABAC1Q9UI14 185 aa9.89□□□□□ -0.83
CLPTM1-208ENST00000588274 TBC1D24Q9ULP9 559 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms