RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 C11orf68Q9H3H3 251 aaKnown RBP11.36□□□□□ -0.59
NME3-211ENST00000568561 TRAV14DV4A0A0A6YYC5 116 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 IGKV1-39P01597 117 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 APOHP02749 345 aaPredicted RBP11.35□□□□□ -0.59
NME3-211ENST00000568561 IGKV1D-39P04432 117 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 HLA-DMAP28067 261 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 HRH1P35367 487 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 TAS2R46P59540 309 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 UBE2NLQ5JXB2 153 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 FAM90A2PQ658T7 463 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 LILRB2Q8N423 598 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 FAM24BQ8N5W8 94 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 SAMD12Q8N8I0 201 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 S100A16Q96FQ6 103 aaKnown RBP11.35□□□□□ -0.59
NME3-211ENST00000568561 CMTM3Q96MX0 182 aa11.35□□□□□ -0.59
NME3-211ENST00000568561 GNG7O60262 68 aa11.34□□□□□ -0.59
NME3-211ENST00000568561 IFNA4P05014 189 aa11.34□□□□□ -0.59
NME3-211ENST00000568561 IZUMO4Q1ZYL8 232 aa11.34□□□□□ -0.59
NME3-211ENST00000568561 TOMM20LQ6UXN7 152 aa11.34□□□□□ -0.59
NME3-211ENST00000568561 TBC1D26Q86UD7 250 aa11.34□□□□□ -0.59
NME3-211ENST00000568561 OR6F1Q8NGZ6 308 aa11.34□□□□□ -0.59
NME3-211ENST00000568561 OR4A16Q8NH70 328 aa11.34□□□□□ -0.59
NME3-211ENST00000568561 MRGPRFQ96AM1 343 aa11.34□□□□□ -0.59
NME3-211ENST00000568561 TSC22D3Q99576 134 aa11.34□□□□□ -0.59
NME3-211ENST00000568561 MFFQ9GZY8 342 aa11.34□□□□□ -0.59
NME3-211ENST00000568561 FKBP11Q9NYL4 201 aa11.34□□□□□ -0.59
NME3-211ENST00000568561 ST8SIA3O43173 380 aa11.33□□□□□ -0.6
NME3-211ENST00000568561 DFFBO76075 338 aa11.33□□□□□ -0.6
NME3-211ENST00000568561 NAT1P18440 290 aa11.33□□□□□ -0.6
NME3-211ENST00000568561 DEFB131AP59861 70 aa11.33□□□□□ -0.6
NME3-211ENST00000568561 PRCDQ00LT1 54 aa11.33□□□□□ -0.6
NME3-211ENST00000568561 LYSMD2Q8IV50 215 aa11.33□□□□□ -0.6
NME3-211ENST00000568561 CADM3Q8N126 398 aa11.33□□□□□ -0.6
NME3-211ENST00000568561 SEC22AQ96IW7 307 aa11.33□□□□□ -0.6
NME3-211ENST00000568561 MS4A6AQ9H2W1 248 aa11.33□□□□□ -0.6
NME3-211ENST00000568561 DNAH2Q9P225 4427 aa11.33□□□□□ -0.6
NME3-211ENST00000568561 FAT2Q9NYQ8 4349 aa11.32□□□□□ -0.6
NME3-211ENST00000568561 EIF4EP06730 217 aaKnown RBP11.32□□□□□ -0.6
NME3-211ENST00000568561 PRSS3P35030 304 aa11.32□□□□□ -0.6
NME3-211ENST00000568561 CMC4P56277 68 aaPredicted RBP11.32□□□□□ -0.6
NME3-211ENST00000568561 LSM3P62310 102 aaKnown RBP11.32□□□□□ -0.6
NME3-211ENST00000568561 RPL11P62913 178 aaKnown RBP11.32□□□□□ -0.6
NME3-211ENST00000568561 PAFAH1B2P68402 229 aa11.32□□□□□ -0.6
NME3-211ENST00000568561 TMEM187Q14656 261 aa11.32□□□□□ -0.6
NME3-211ENST00000568561 H2BFWTQ7Z2G1 175 aa11.32□□□□□ -0.6
NME3-211ENST00000568561 ZNF114Q8NC26 417 aa11.32□□□□□ -0.6
NME3-211ENST00000568561 C2CD4CQ8TF44 421 aa11.32□□□□□ -0.6
NME3-211ENST00000568561 YIPF6Q96EC8 236 aa11.32□□□□□ -0.6
NME3-211ENST00000568561 TXN2Q99757 166 aa11.32□□□□□ -0.6
NME3-211ENST00000568561 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
NME3-211ENST00000568561 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
NME3-211ENST00000568561 PUS1Q9Y606 427 aaKnown RBP eCLIP11.32□□□□□ -0.6
NME3-211ENST00000568561 IGLL5B9A064 214 aa11.31□□□□□ -0.6
NME3-211ENST00000568561 DNASE2O00115 360 aaPredicted RBP11.31□□□□□ -0.6
NME3-211ENST00000568561 RPS19P39019 145 aaKnown RBP11.31□□□□□ -0.6
NME3-211ENST00000568561 TSPAN5P62079 268 aa11.31□□□□□ -0.6
NME3-211ENST00000568561 GPR141Q7Z602 305 aa11.31□□□□□ -0.6
NME3-211ENST00000568561 VSIRQ9H7M9 311 aa11.31□□□□□ -0.6
NME3-211ENST00000568561 RABAC1Q9UI14 185 aa11.31□□□□□ -0.6
NME3-211ENST00000568561 DNAH17Q9UFH2 4485 aa11.3□□□□□ -0.6
NME3-211ENST00000568561 A0A1B0GU03 582 aa11.3□□□□□ -0.6
NME3-211ENST00000568561 HSPE1P61604 102 aaKnown RBP11.3□□□□□ -0.6
NME3-211ENST00000568561 Q8NAQ8 132 aa11.3□□□□□ -0.6
NME3-211ENST00000568561 BATF3Q9NR55 127 aa11.3□□□□□ -0.6
NME3-211ENST00000568561 IGHV4-28A0A0C4DH34 117 aa11.29□□□□□ -0.6
NME3-211ENST00000568561 ERHP84090 104 aaKnown RBP11.29□□□□□ -0.6
NME3-211ENST00000568561 ZNF600Q6ZNG1 722 aa11.29□□□□□ -0.6
NME3-211ENST00000568561 SNX29P2Q8IUI4 249 aa11.29□□□□□ -0.6
NME3-211ENST00000568561 GPX8Q8TED1 209 aa11.29□□□□□ -0.6
NME3-211ENST00000568561 MRPL36Q9P0J6 103 aaKnown RBP11.29□□□□□ -0.6
NME3-211ENST00000568561 APLNQ9ULZ1 77 aa11.29□□□□□ -0.6
NME3-211ENST00000568561 RYR1P21817 5038 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 A6NHS1 94 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 TMEM127O75204 238 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 IGKV1-5P01602 117 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 GIG44P09565 113 aaPredicted RBP11.28□□□□□ -0.6
NME3-211ENST00000568561 RBMY1A1P0DJD3 496 aaKnown RBP11.28□□□□□ -0.6
NME3-211ENST00000568561 RBMY1CP0DJD4 496 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 PI3P19957 117 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 C4BPBP20851 252 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 S100GP29377 79 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 NPBWR1P48145 328 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 PPP5CP53041 499 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 RBMY1FQ15415 496 aaKnown RBP11.28□□□□□ -0.6
NME3-211ENST00000568561 CROCCP3Q8IVE0 287 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 STHQ8IWL8 128 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 DUSP18Q8NEJ0 188 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 STXBP6Q8NFX7 210 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 FUNDC2Q9BWH2 189 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 RBM38Q9H0Z9 239 aaKnown RBP11.28□□□□□ -0.6
NME3-211ENST00000568561 FAM212BQ9NTI7 297 aaPredicted RBP11.28□□□□□ -0.6
NME3-211ENST00000568561 NDUFA13Q9P0J0 144 aa11.28□□□□□ -0.6
NME3-211ENST00000568561 SMIM31A0A1B0GVY4 71 aa11.27□□□□□ -0.61
NME3-211ENST00000568561 KNCNA6PVL3 124 aa11.27□□□□□ -0.61
NME3-211ENST00000568561 M0QYG6 137 aa11.27□□□□□ -0.61
NME3-211ENST00000568561 HLA-DMBP28068 263 aa11.27□□□□□ -0.61
NME3-211ENST00000568561 SNCAP37840 140 aa11.27□□□□□ -0.61
NME3-211ENST00000568561 RNASE12Q5GAN4 147 aaKnown RBP11.27□□□□□ -0.61
NME3-211ENST00000568561 LPCAT3Q6P1A2 487 aa11.27□□□□□ -0.61
NME3-211ENST00000568561 Q6ZTC4 211 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms