RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 KMT2EQ8IZD2 1858 aa3.73□□□□□ -1.81
SMG1-207ENST00000563235 TSC2P49815 1807 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 SNRPGP15A8MWD9 76 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 GSTZ1O43708 216 aaPredicted RBP3.72□□□□□ -1.81
SMG1-207ENST00000563235 OR2T1O43869 369 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 GUCA1AP43080 201 aaPredicted RBP3.72□□□□□ -1.81
SMG1-207ENST00000563235 TPPP2P59282 170 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 RPS23P62266 143 aaKnown RBP3.72□□□□□ -1.81
SMG1-207ENST00000563235 TTC9CQ8N5M4 171 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 SAMD12Q8N8I0 201 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 CIB3Q96Q77 187 aaPredicted RBP3.72□□□□□ -1.81
SMG1-207ENST00000563235 ATG5Q9H1Y0 275 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 HEBP1Q9NRV9 189 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 FKBP11Q9NYL4 201 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 BDP1A6H8Y1 2624 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 SMIM26A0A096LP01 95 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 ODAMA1E959 279 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 SIX6O95475 246 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 CD1DP15813 335 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 RPS4Y1P22090 263 aaKnown RBP3.72□□□□□ -1.81
SMG1-207ENST00000563235 DYNLT1P63172 113 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 PRR3P79522 188 aaKnown RBP3.72□□□□□ -1.81
SMG1-207ENST00000563235 HOXA4Q00056 320 aaPredicted RBP3.72□□□□□ -1.81
SMG1-207ENST00000563235 ABCA11PQ4W5N1 156 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 PIP4P1Q86T03 277 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 OR2M3Q8NG83 312 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 C18orf12Q96KH6 178 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 MARCH5Q9NX47 278 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 MDFICQ9P1T7 246 aa3.72□□□□□ -1.81
SMG1-207ENST00000563235 ARRDC5A6NEK1 342 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 ZNF705GA8MUZ8 300 aaPredicted RBP3.71□□□□□ -1.81
SMG1-207ENST00000563235 POLR2JP52435 117 aaKnown RBP3.71□□□□□ -1.81
SMG1-207ENST00000563235 FOXA3P55318 350 aaPredicted RBP3.71□□□□□ -1.81
SMG1-207ENST00000563235 CCL23P55773 120 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 HERVK_113P63121 156 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 ZNF678Q5SXM1 525 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 WDR86Q86TI4 376 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 TEX29Q8N6K0 151 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 OR9G1Q8NH87 305 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 BRK1Q8WUW1 75 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 NMNAT3Q96T66 252 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 CLCF1Q9UBD9 225 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 RNF114Q9Y508 228 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 DNAJC15Q9Y5T4 150 aa3.71□□□□□ -1.81
SMG1-207ENST00000563235 HTTP42858 3142 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 TRAV8-3A0A0A6YYJ7 113 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.71□□□□□ -1.82
SMG1-207ENST00000563235 C12orf77C9JDV5 145 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 PIRO00625 290 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 GNGT2O14610 69 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 FRMD6-AS1P0C7T7 363 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 GATA2P23769 480 aaPredicted RBP3.71□□□□□ -1.82
SMG1-207ENST00000563235 TAS2R46P59540 309 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 SNRPGP62308 76 aaKnown RBP3.71□□□□□ -1.82
SMG1-207ENST00000563235 AKR1C1Q04828 323 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 MSMO1Q15800 293 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 VMA21Q3ZAQ7 101 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 KLF17Q5JT82 389 aaPredicted RBP3.71□□□□□ -1.82
SMG1-207ENST00000563235 LINC00173Q6ZV60 143 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 FAM57BQ71RH2 274 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 VN1R4Q7Z5H5 301 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 OR10J6PQ8NGY7 276 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 C18orf15Q96N68 181 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 PAXXQ9BUH6 204 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 WDR61Q9GZS3 305 aaKnown RBP3.71□□□□□ -1.82
SMG1-207ENST00000563235 AICDAQ9GZX7 198 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 TAS2R8Q9NYW2 309 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 SPRR3Q9UBC9 169 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 FLVCR1Q9Y5Y0 555 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 NUP210Q8TEM1 1887 aaPredicted RBP3.71□□□□□ -1.82
SMG1-207ENST00000563235 PATJQ8NI35 1801 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 TCF20Q9UGU0 1960 aaKnown RBP3.71□□□□□ -1.82
SMG1-207ENST00000563235 A0A0D9SG52 128 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 A0A1B0GTL3 188 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 OR4C45A6NMZ5 311 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 KLLNB2CW77 178 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 KLF7O75840 302 aaPredicted RBP3.71□□□□□ -1.82
SMG1-207ENST00000563235 LYZL6O75951 148 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 C1QL1O75973 258 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 SOD1P00441 154 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 OR5AC1P0C628 307 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 FABP4P15090 132 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 PPP1CAP62136 330 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 SRSF3P84103 164 aaKnown RBP3.71□□□□□ -1.82
SMG1-207ENST00000563235 KLF9Q13886 244 aaPredicted RBP3.71□□□□□ -1.82
SMG1-207ENST00000563235 HMGN3Q15651 99 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 RTL8BQ17RB0 113 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 SSX8Q7RTT4 187 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 LINC00596Q86U02 117 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 LRRTM1Q86UE6 522 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 SUMF2Q8NBJ7 301 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 OSR1Q8TAX0 266 aaPredicted RBP3.71□□□□□ -1.82
SMG1-207ENST00000563235 TWIST2Q8WVJ9 160 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 RTL8AQ9BWD3 113 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 NPVFQ9HCQ7 196 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 KCNE3Q9Y6H6 103 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 ENPP4Q9Y6X5 453 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 MICAL3Q7RTP6 2002 aa3.71□□□□□ -1.82
SMG1-207ENST00000563235 NCOR1O75376 2440 aa3.7□□□□□ -1.82
SMG1-207ENST00000563235 ZNF318Q5VUA4 2279 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms