RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 MDFIC2A0A1B0GVS7 189 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 SMCO3A2RU48 225 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 A6NDX4 124 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 C15orf62A8K5M9 175 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 FNDC10F2Z333 226 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 H3BUX3 64 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 CORTO00230 105 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 FCN1O00602 326 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 CNIH1O95406 144 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 FGF7P21781 194 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 ATP6V0CP27449 155 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 ZNF616Q08AN1 781 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 TNXAQ16473 311 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 C2orf83Q53S99 150 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 C10orf55Q5SWW7 151 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 ETFRF1Q6IPR1 90 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 IL34Q6ZMJ4 242 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 TMEM182Q6ZP80 229 aaPredicted RBP6.77□□□□□ -1.33
VAPB-206ENST00000520497 COMMD1Q8N668 190 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 LFNGQ8NES3 379 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 C22orf15Q8WYQ4 148 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 BSCL2Q96G97 398 aaPredicted RBP6.77□□□□□ -1.33
VAPB-206ENST00000520497 ZNF48Q96MX3 618 aaPredicted RBP6.77□□□□□ -1.33
VAPB-206ENST00000520497 RBM14Q96PK6 669 aaKnown RBP6.77□□□□□ -1.33
VAPB-206ENST00000520497 CITED4Q96RK1 184 aa6.77□□□□□ -1.33
VAPB-206ENST00000520497 WDR61Q9GZS3 305 aaKnown RBP6.77□□□□□ -1.33
VAPB-206ENST00000520497 ANK3Q12955 4377 aaKnown RBP6.76□□□□□ -1.33
VAPB-206ENST00000520497 BTBD17A6NE02 478 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 TEX22C9J3V5 150 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 INAFM1C9JVW0 142 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 TSPAN15O95858 294 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 CA2P00918 260 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 HLA-DRB1P01911 266 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 HBE1P02100 147 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 IER3P46695 156 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 SMCPP49901 116 aaPredicted RBP6.76□□□□□ -1.33
VAPB-206ENST00000520497 GNB1P62873 340 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 AKR1C1Q04828 323 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 VWC2Q2TAL6 325 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 BSXQ3C1V8 233 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 UQCC3Q6UW78 93 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 Q6YL49 198 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 Q6ZRG5 221 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 IL17RELQ6ZVW7 336 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 C16orf82Q7Z2V1 217 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 C5orf56Q8N8D9 126 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 OR1L6Q8NGR2 347 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 FAM213BQ8TBF2 198 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 RNASEH2CQ8TDP1 164 aaKnown RBP6.76□□□□□ -1.33
VAPB-206ENST00000520497 ABHD5Q8WTS1 349 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 TAF15Q92804 592 aaKnown RBP eCLIP6.76□□□□□ -1.33
VAPB-206ENST00000520497 SLC35E1Q96K37 410 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 SLC25A33Q9BSK2 321 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 YAE1D1Q9NRH1 226 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 PITPNC1Q9UKF7 332 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 MOB4Q9Y3A3 225 aa6.76□□□□□ -1.33
VAPB-206ENST00000520497 IGHV7-81A0A0B4J1V7 117 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 IGLC7A0M8Q6 106 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 RAB19A4D1S5 217 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 NCBP2LA6PVI3 153 aaKnown RBP6.75□□□□□ -1.33
VAPB-206ENST00000520497 PMS2P5A8MQ11 134 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 OPN1MWP04001 364 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 AMY1AP04745 511 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 OPN1MW2P0DN77 364 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 OPN1MW3P0DN78 364 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 OR13C7P0DN81 318 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 CX3CL1P78423 397 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 NDPQ00604 133 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 WT1-ASQ06250 92 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 PXDC1Q5TGL8 231 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 ZNF562Q6V9R5 426 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 HAPLN4Q86UW8 402 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 TMEM219Q86XT9 240 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 OR10W1Q8NGF6 305 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 OR5R1Q8NH85 324 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 TMEM170AQ8WVE7 144 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 SRSF12Q8WXF0 261 aaKnown RBP6.75□□□□□ -1.33
VAPB-206ENST00000520497 CACNG8Q8WXS5 425 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 MARC2Q969Z3 335 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 CXorf58Q96LI9 332 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 PBDC1Q9BVG4 233 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 SH3BGRL3Q9H299 93 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 NPVFQ9HCQ7 196 aa6.75□□□□□ -1.33
VAPB-206ENST00000520497 CUBNO60494 3623 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 PRSS46E5RG02 174 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 I3L521 148 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 SCGB2A1O75556 95 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 IFNA1P01562 189 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 IGHV4-59P01825 116 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 H2AFB1P0C5Y9 115 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 FAM157CP0CG43 387 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 RNASE2P10153 161 aaKnown RBP6.74□□□□□ -1.33
VAPB-206ENST00000520497 HNF1AP20823 631 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 GPX4P36969 197 aaPredicted RBP6.74□□□□□ -1.33
VAPB-206ENST00000520497 ARL16Q0P5N6 197 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 FXYD3Q14802 87 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 LY6EQ16553 131 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 ACOT6Q3I5F7 207 aaPredicted RBP6.74□□□□□ -1.33
VAPB-206ENST00000520497 TMEM41BQ5BJD5 291 aa6.74□□□□□ -1.33
VAPB-206ENST00000520497 PVRIGQ6DKI7 326 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms