RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 KLK9Q9UKQ9 250 aa7.14□□□□□ -1.27
HDAC3-215ENST00000519474 A0A1W2PPV4 95 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 MPPED1O15442 326 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 ARPC5O15511 151 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 CREBL2O60519 120 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-215ENST00000519474 SNAPC5O75971 98 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 DFFBO76075 338 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 NDUFB8O95169 186 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 LY86O95711 162 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 IGLV1-51P01701 117 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 CSN3P07498 182 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 NHLRC4P0CG21 123 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-215ENST00000519474 SCGB1A1P11684 91 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 GP9P14770 177 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 HLA-DMAP28067 261 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 RPL27AP46776 148 aaKnown RBP7.13□□□□□ -1.27
HDAC3-215ENST00000519474 SYNJ2BPP57105 145 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 POU2AF1Q16633 256 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 HAGHQ16775 308 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 ZNF585BQ52M93 769 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 OR4A47Q6IF82 309 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 C19orf35Q6ZS72 473 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 ARRDC1Q8N5I2 433 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 C12orf45Q8N5I9 185 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-215ENST00000519474 RBPMSQ93062 196 aaKnown RBP7.13□□□□□ -1.27
HDAC3-215ENST00000519474 MOB3AQ96BX8 217 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 FYTTD1Q96QD9 318 aaKnown RBP7.13□□□□□ -1.27
HDAC3-215ENST00000519474 ASCL2Q99929 193 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 ELOVL1Q9BW60 279 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 PLEKHA2Q9HB19 425 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 BET1LQ9NYM9 111 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 SCP2D1Q9UJQ7 156 aa7.13□□□□□ -1.27
HDAC3-215ENST00000519474 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.12□□□□□ -1.27
HDAC3-215ENST00000519474 FAM223BA6NKX1 122 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 NPIPB5A8MRT5 1133 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 BMPR1BO00238 502 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 OR2J3O76001 311 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 GABARAPO95166 117 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 AREGP15514 252 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 ZNF182P17025 639 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-215ENST00000519474 HRH1P35367 487 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 LPAR6P43657 344 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 TAS2R31P59538 309 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 RPL8P62917 257 aaKnown RBP7.12□□□□□ -1.27
HDAC3-215ENST00000519474 TATDN3Q17R31 274 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 ADAMTSL5Q6ZMM2 481 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 HAPLN4Q86UW8 402 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 SLC25A42Q86VD7 318 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 SNX29P2Q8IUI4 249 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 FAM223AQ8IWN6 122 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 TCTE3Q8IZS6 198 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 NHLRC2Q8NBF2 726 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 NECAP1Q8NC96 275 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 OR9G4Q8NGQ1 327 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 OR5H2Q8NGV7 314 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 OR51H1Q8NH63 302 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 OR4A5Q8NH83 315 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 GLYATL2Q8WU03 294 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 FAM212BQ9NTI7 297 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-215ENST00000519474 FBXL7Q9UJT9 491 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 ZNF257Q9Y2Q1 563 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 SMAD5-AS1Q9Y6J3 95 aa7.12□□□□□ -1.27
HDAC3-215ENST00000519474 TEX50A0A1B0GTY4 177 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 GGCTO75223 188 aaKnown RBP7.11□□□□□ -1.27
HDAC3-215ENST00000519474 S1PR2O95136 353 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 OR2C1O95371 312 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 RPA2P15927 270 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 HLA-GP17693 338 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 F2RP25116 425 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 UCP1P25874 307 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 TAS2R46P59540 309 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 OR2B8PP59922 312 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 HERV-K104P61576 105 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 CATR1Q13166 79 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 AADACL3Q5VUY0 350 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 LPCAT3Q6P1A2 487 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 SBSPONQ8IVN8 264 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 GDPD1Q8N9F7 314 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 OR10W1Q8NGF6 305 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 FCAMRQ8WWV6 532 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 ABHD1Q96SE0 405 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 FAM110AQ9BQ89 295 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 TMPRSS5Q9H3S3 457 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 HRASLSQ9HDD0 168 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 PGPEP1Q9NXJ5 209 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 SIGLEC8Q9NYZ4 499 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 KLK11Q9UBX7 282 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 TNFRSF18Q9Y5U5 241 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 DNAH3Q8TD57 4116 aa7.11□□□□□ -1.27
HDAC3-215ENST00000519474 TEX13DA0A0J9YY54 714 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-215ENST00000519474 IGLC7A0M8Q6 106 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 DNASE2O00115 360 aaPredicted RBP7.1□□□□□ -1.27
HDAC3-215ENST00000519474 GPR31O00270 319 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 KRASP01116 189 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 REG1AP05451 166 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 ANXA7P20073 488 aaKnown RBP7.1□□□□□ -1.27
HDAC3-215ENST00000519474 S100A11P31949 105 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 UCP3P55916 312 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 PKIAP61925 76 aa7.1□□□□□ -1.27
HDAC3-215ENST00000519474 EXOSC2Q13868 293 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms