RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 SCP2D1Q9UJQ7 156 aa13.14□□□□□ -0.31
SEC13-218ENST00000490283 SELENOKQ9Y6D0 94 aa13.14□□□□□ -0.31
SEC13-218ENST00000490283 FABP12A6NFH5 140 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 ST8SIA3O43173 380 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 GSTZ1O43708 216 aaPredicted RBP13.13□□□□□ -0.31
SEC13-218ENST00000490283 MT-CO2P00403 227 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 C8orf88P0DMB2 117 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 DHODHQ02127 395 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 SPINK9Q5DT21 86 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 LAMTOR1Q6IAA8 161 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 FAM219AQ8IW50 185 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 DEFB125Q8N687 156 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 MUC7Q8TAX7 377 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 SCGB3A2Q96PL1 93 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 CHRDL1Q9BU40 450 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 TMEM222Q9H0R3 208 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 NAA60Q9H7X0 242 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 TENM3Q9P273 2699 aa13.13□□□□□ -0.31
SEC13-218ENST00000490283 A0A0B4J293 547 aa13.12□□□□□ -0.31
SEC13-218ENST00000490283 I3L2K1 104 aa13.12□□□□□ -0.31
SEC13-218ENST00000490283 CORTO00230 105 aa13.12□□□□□ -0.31
SEC13-218ENST00000490283 GNG7O60262 68 aa13.12□□□□□ -0.31
SEC13-218ENST00000490283 OR5AC1P0C628 307 aa13.12□□□□□ -0.31
SEC13-218ENST00000490283 OR51S1Q8NGJ8 323 aa13.12□□□□□ -0.31
SEC13-218ENST00000490283 CITED4Q96RK1 184 aa13.12□□□□□ -0.31
SEC13-218ENST00000490283 C5orf66Q9H5L9 145 aa13.12□□□□□ -0.31
SEC13-218ENST00000490283 MCUBQ9NWR8 336 aa13.12□□□□□ -0.31
SEC13-218ENST00000490283 ANKRD20A5PA0PJZ0 165 aa13.11□□□□□ -0.31
SEC13-218ENST00000490283 C15orf62A8K5M9 175 aa13.11□□□□□ -0.31
SEC13-218ENST00000490283 K7EMT4 169 aa13.11□□□□□ -0.31
SEC13-218ENST00000490283 YIF1AO95070 293 aa13.11□□□□□ -0.31
SEC13-218ENST00000490283 P0C879 139 aa13.11□□□□□ -0.31
SEC13-218ENST00000490283 FCGR2BP31994 310 aaPredicted RBP13.11□□□□□ -0.31
SEC13-218ENST00000490283 TNFSF8P32971 234 aa13.11□□□□□ -0.31
SEC13-218ENST00000490283 FAUP35544 74 aaKnown RBP13.11□□□□□ -0.31
SEC13-218ENST00000490283 NPBWR1P48145 328 aa13.11□□□□□ -0.31
SEC13-218ENST00000490283 DUSP18Q8NEJ0 188 aa13.11□□□□□ -0.31
SEC13-218ENST00000490283 RBPMSQ93062 196 aaKnown RBP13.11□□□□□ -0.31
SEC13-218ENST00000490283 SPAG8Q99932 426 aaPredicted RBP13.11□□□□□ -0.31
SEC13-218ENST00000490283 RTBDNQ9BSG5 229 aaPredicted RBP13.11□□□□□ -0.31
SEC13-218ENST00000490283 KCNIP3Q9Y2W7 256 aa13.11□□□□□ -0.31
SEC13-218ENST00000490283 STAB2Q8WWQ8 2551 aa13.11□□□□□ -0.31
SEC13-218ENST00000490283 F8W735 103 aaPredicted RBP13.1□□□□□ -0.31
SEC13-218ENST00000490283 INS-IGF2F8WCM5 200 aa13.1□□□□□ -0.31
SEC13-218ENST00000490283 SCGB2A1O75556 95 aa13.1□□□□□ -0.31
SEC13-218ENST00000490283 CDS2O95674 445 aa13.1□□□□□ -0.31
SEC13-218ENST00000490283 CTSGP08311 255 aa13.1□□□□□ -0.31
SEC13-218ENST00000490283 S100A5P33763 92 aa13.1□□□□□ -0.31
SEC13-218ENST00000490283 ADMP35318 185 aa13.1□□□□□ -0.31
SEC13-218ENST00000490283 AP3S2P59780 193 aa13.1□□□□□ -0.31
SEC13-218ENST00000490283 WFDC10AQ9H1F0 79 aa13.1□□□□□ -0.31
SEC13-218ENST00000490283 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.1□□□□□ -0.31
SEC13-218ENST00000490283 GPR132Q9UNW8 380 aa13.1□□□□□ -0.31
SEC13-218ENST00000490283 IGHV3OR16-8A0A075B7F1 116 aa13.09□□□□□ -0.31
SEC13-218ENST00000490283 CRYM-AS1A6NIL9 109 aa13.09□□□□□ -0.31
SEC13-218ENST00000490283 ZNF207O43670 478 aaKnown RBP13.09□□□□□ -0.31
SEC13-218ENST00000490283 LYL1P12980 280 aa13.09□□□□□ -0.31
SEC13-218ENST00000490283 BMI1P35226 326 aa13.09□□□□□ -0.31
SEC13-218ENST00000490283 ETV6P41212 452 aa13.09□□□□□ -0.31
SEC13-218ENST00000490283 TMEM268Q5VZI3 342 aa13.09□□□□□ -0.31
SEC13-218ENST00000490283 GLYATL2Q8WU03 294 aa13.09□□□□□ -0.31
SEC13-218ENST00000490283 NXF2Q9GZY0 626 aaKnown RBP13.09□□□□□ -0.31
SEC13-218ENST00000490283 CACFD1Q9UGQ2 172 aa13.09□□□□□ -0.31
SEC13-218ENST00000490283 OR4C46A6NHA9 309 aa13.08□□□□□ -0.32
SEC13-218ENST00000490283 TSPAN4O14817 238 aa13.08□□□□□ -0.32
SEC13-218ENST00000490283 IGHV3-48P01763 117 aa13.08□□□□□ -0.32
SEC13-218ENST00000490283 SPCS3P61009 180 aa13.08□□□□□ -0.32
SEC13-218ENST00000490283 PYDC2Q56P42 97 aa13.08□□□□□ -0.32
SEC13-218ENST00000490283 LINC00322Q6ZN03 302 aaPredicted RBP13.08□□□□□ -0.32
SEC13-218ENST00000490283 GINS3Q9BRX5 216 aa13.08□□□□□ -0.32
SEC13-218ENST00000490283 A0A0G2JRQ6 117 aa13.07□□□□□ -0.32
SEC13-218ENST00000490283 RBMY1BA6NDE4 496 aaKnown RBP13.07□□□□□ -0.32
SEC13-218ENST00000490283 RBMY1EA6NEQ0 496 aaKnown RBP13.07□□□□□ -0.32
SEC13-218ENST00000490283 RBMY1DP0C7P1 496 aaKnown RBP13.07□□□□□ -0.32
SEC13-218ENST00000490283 ANXA3P12429 323 aa13.07□□□□□ -0.32
SEC13-218ENST00000490283 OPRK1P41145 380 aa13.07□□□□□ -0.32
SEC13-218ENST00000490283 SELENOHQ8IZQ5 122 aaKnown RBP13.07□□□□□ -0.32
SEC13-218ENST00000490283 OR52E5Q8NH55 327 aa13.07□□□□□ -0.32
SEC13-218ENST00000490283 CACNG5Q9UF02 275 aa13.07□□□□□ -0.32
SEC13-218ENST00000490283 TRAV14DV4A0A0A6YYC5 116 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 PIGBOS1A0A0B4J2F0 54 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 IGHV7-4-1A0A0J9YVY3 117 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 RNASE2P10153 161 aaKnown RBP13.06□□□□□ -0.32
SEC13-218ENST00000490283 TOMM5Q8N4H5 51 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 TMEM116Q8NCL8 245 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 LHFPL5Q8TAF8 219 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 IL22RA2Q969J5 263 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 GALNT14Q96FL9 552 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 SOSTQ9BQB4 213 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 GGTLC1Q9BX51 225 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 HIPK2Q9H2X6 1198 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 HEYLQ9NQ87 328 aaPredicted RBP13.06□□□□□ -0.32
SEC13-218ENST00000490283 SMPXQ9UHP9 88 aa13.06□□□□□ -0.32
SEC13-218ENST00000490283 HUWE1Q7Z6Z7 4374 aaKnown RBP13.05□□□□□ -0.32
SEC13-218ENST00000490283 LOC102724200A0A096LPH7 203 aaPredicted RBP13.05□□□□□ -0.32
SEC13-218ENST00000490283 RPS10-NUDT3A0A1W2PQS6 291 aa13.05□□□□□ -0.32
SEC13-218ENST00000490283 CEBPZOSA8MTT3 80 aa13.05□□□□□ -0.32
SEC13-218ENST00000490283 AKR1C4P17516 323 aa13.05□□□□□ -0.32
SEC13-218ENST00000490283 HTR2BP41595 481 aa13.05□□□□□ -0.32
SEC13-218ENST00000490283 SRPXP78539 464 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms