RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 ELOVL1Q9BW60 279 aa13.46□□□□□ -0.25
CMTM3-202ENST00000424011 TCF19Q9Y242 345 aa13.46□□□□□ -0.25
CMTM3-202ENST00000424011 HCFC1P51610 2035 aa13.46□□□□□ -0.25
CMTM3-202ENST00000424011 C20orf202A1L168 122 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 RBP4P02753 201 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 HNF1AP20823 631 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 VDAC2P45880 294 aaPredicted RBP13.46□□□□□ -0.26
CMTM3-202ENST00000424011 ZNF137PP52743 207 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 HSPE1P61604 102 aaKnown RBP13.46□□□□□ -0.26
CMTM3-202ENST00000424011 ZNF841Q6ZN19 808 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 DTX2Q86UW9 622 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 ABHD12Q8N2K0 398 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 OR51G1Q8NGK1 321 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 TMEM133Q9H2Q1 129 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 ENY2Q9NPA8 101 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 AURKAIP1Q9NWT8 199 aaPredicted RBP13.46□□□□□ -0.26
CMTM3-202ENST00000424011 FUT9Q9Y231 359 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 ZNF257Q9Y2Q1 563 aa13.46□□□□□ -0.26
CMTM3-202ENST00000424011 MAP1LC3B2A6NCE7 125 aa13.45□□□□□ -0.26
CMTM3-202ENST00000424011 TFPI2P48307 235 aa13.45□□□□□ -0.26
CMTM3-202ENST00000424011 C16orf82Q7Z2V1 217 aa13.45□□□□□ -0.26
CMTM3-202ENST00000424011 NEIL1Q96FI4 390 aaPredicted RBP13.45□□□□□ -0.26
CMTM3-202ENST00000424011 PCGF1Q9BSM1 259 aa13.45□□□□□ -0.26
CMTM3-202ENST00000424011 MRPL20Q9BYC9 149 aaKnown RBP13.45□□□□□ -0.26
CMTM3-202ENST00000424011 MAP1LC3BQ9GZQ8 125 aa13.45□□□□□ -0.26
CMTM3-202ENST00000424011 GSX1Q9H4S2 264 aaPredicted RBP13.45□□□□□ -0.26
CMTM3-202ENST00000424011 ZNRD1Q9P1U0 126 aa13.45□□□□□ -0.26
CMTM3-202ENST00000424011 ARFGEF3Q5TH69 2177 aa13.45□□□□□ -0.26
CMTM3-202ENST00000424011 K7EP13 123 aa13.45□□□□□ -0.26
CMTM3-202ENST00000424011 BCL2P10415 239 aa13.45□□□□□ -0.26
CMTM3-202ENST00000424011 RANP62826 216 aaKnown RBP13.45□□□□□ -0.26
CMTM3-202ENST00000424011 BET1LQ9NYM9 111 aa13.45□□□□□ -0.26
CMTM3-202ENST00000424011 EPG5Q9HCE0 2579 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 H0YJW9 148 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 IGKV1-16P04430 117 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 PDPNQ86YL7 162 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 MS4A10Q96PG2 267 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 NPCDR1Q9BY65 106 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 SLC39A9Q9NUM3 307 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 SPTBN1Q01082 2364 aaKnown RBP13.44□□□□□ -0.26
CMTM3-202ENST00000424011 ZFYVE26Q68DK2 2539 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 UPK2O00526 184 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 GALR1P47211 349 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 CNN1P51911 297 aaKnown RBP13.44□□□□□ -0.26
CMTM3-202ENST00000424011 PRRX1P54821 245 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 ZNF709Q8N972 641 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 OR4C13Q8NGP0 309 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 C8orf46Q8TAG6 207 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 ST6GALNAC6Q969X2 333 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 FLYWCH2Q96CP2 140 aaKnown RBP13.44□□□□□ -0.26
CMTM3-202ENST00000424011 P2RX4Q99571 388 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 OR51B2Q9Y5P1 312 aa13.44□□□□□ -0.26
CMTM3-202ENST00000424011 C17orf112F2Z3M2 114 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 HMGB3O15347 200 aaKnown RBP13.43□□□□□ -0.26
CMTM3-202ENST00000424011 MC5RP33032 325 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 TMEM177Q53S58 311 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 FFAR4Q5NUL3 377 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 TEX43Q6ZNM6 134 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 ZNF843Q8N446 348 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 NECAP1Q8NC96 275 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 VSTM2AQ8TAG5 236 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 LHX4Q969G2 390 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 SLC35E1Q96K37 410 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 OR5B12Q96R08 314 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 CHODLQ9H9P2 273 aa13.43□□□□□ -0.26
CMTM3-202ENST00000424011 PPIAL4CA0A0B4J2A2 164 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 RRHO14718 337 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 CCL25O15444 150 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 PPIAL4GP0DN37 164 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 PTTG1IPP53801 180 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 HARBI1Q96MB7 349 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 IMMP2LQ96T52 175 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 NABP2Q9BQ15 211 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 SLC25A22Q9H936 323 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 A0A1W2PN81 502 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 KBTBD11O94819 623 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 CD1BP29016 333 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 CHRNA7P36544 502 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 ATP5IP56385 69 aaPredicted RBP13.42□□□□□ -0.26
CMTM3-202ENST00000424011 Q8N7P7 452 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 OR10G9Q8NGN4 311 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 OR10G7Q8NGN6 311 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 OR5B3Q8NH48 314 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 OR4A5Q8NH83 315 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 NAT8Q9UHE5 227 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 WASHC3Q9Y3C0 194 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 TET2Q6N021 2002 aaPredicted RBP13.42□□□□□ -0.26
CMTM3-202ENST00000424011 PKDREJQ9NTG1 2253 aa13.42□□□□□ -0.26
CMTM3-202ENST00000424011 MPDU1O75352 247 aa13.41□□□□□ -0.26
CMTM3-202ENST00000424011 ADIRFQ15847 76 aa13.41□□□□□ -0.26
CMTM3-202ENST00000424011 PLEKHA3Q9HB20 300 aa13.41□□□□□ -0.26
CMTM3-202ENST00000424011 SRRM4A7MD48 611 aaKnown RBP13.41□□□□□ -0.26
CMTM3-202ENST00000424011 SAA1P0DJI8 122 aaPredicted RBP13.41□□□□□ -0.26
CMTM3-202ENST00000424011 TMEM11P17152 192 aa13.41□□□□□ -0.26
CMTM3-202ENST00000424011 REG1BP48304 166 aa13.41□□□□□ -0.26
CMTM3-202ENST00000424011 PRCDQ00LT1 54 aa13.41□□□□□ -0.26
CMTM3-202ENST00000424011 TMEM183BQ1AE95 376 aa13.41□□□□□ -0.26
CMTM3-202ENST00000424011 TOMM20LQ6UXN7 152 aa13.41□□□□□ -0.26
CMTM3-202ENST00000424011 SLC24A4Q8NFF2 622 aa13.41□□□□□ -0.26
CMTM3-202ENST00000424011 ORAOV1Q8WV07 137 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 125.8 ms