RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 TRAV1-2A0A0B4J238 106 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 TEX50A0A1B0GTY4 177 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 PTGES3LE9PB15 166 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 SULT1C2O00338 296 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 PDCD5O14737 125 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 TNFSF12O43508 249 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 CD74P04233 296 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 CBX5P45973 191 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 OR10A3P58181 314 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 MLLT11Q13015 90 aaPredicted RBP6.76□□□□□ -1.33
NEDD9-203ENST00000397378 C12orf74Q32Q52 190 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 TRPT1Q86TN4 253 aaKnown RBP6.76□□□□□ -1.33
NEDD9-203ENST00000397378 SLC51BQ86UW2 128 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 CADM3Q8N126 398 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 DUSP18Q8NEJ0 188 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 DMBX1Q8NFW5 382 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 SECTM1Q8WVN6 248 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 FRZBQ92765 325 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 LSM10Q969L4 123 aaKnown RBP6.76□□□□□ -1.33
NEDD9-203ENST00000397378 TXN2Q99757 166 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 GINS3Q9BRX5 216 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 NXF2Q9GZY0 626 aaKnown RBP6.76□□□□□ -1.33
NEDD9-203ENST00000397378 ATG5Q9H1Y0 275 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 MS4A6AQ9H2W1 248 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 VSIRQ9H7M9 311 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 SCPEP1Q9HB40 452 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 ACOT13Q9NPJ3 140 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 PFDN2Q9UHV9 154 aa6.76□□□□□ -1.33
NEDD9-203ENST00000397378 IGHV3OR16-13A0A075B7E8 117 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 IGHV3-74A0A0B4J1X5 117 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 LOC105371267A0A1B0GV96 52 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 DNASE2O00115 360 aaPredicted RBP6.75□□□□□ -1.33
NEDD9-203ENST00000397378 YIF1AO95070 293 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 EIF4EP06730 217 aaKnown RBP6.75□□□□□ -1.33
NEDD9-203ENST00000397378 HSMCR30P0CW71 290 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 MFAP4P55083 255 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 S100A12P80511 92 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 ZNF767PQ75MW2 155 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 ZNF367Q7RTV3 350 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 CSNK1G2-AS1Q8NCQ2 148 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 OR13F1Q8NGS4 319 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 NUDCD2Q8WVJ2 157 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 SCRT1Q9BWW7 348 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 COMMD9Q9P000 198 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 CELA1Q9UNI1 258 aa6.75□□□□□ -1.33
NEDD9-203ENST00000397378 FLG2Q5D862 2391 aaPredicted RBP6.74□□□□□ -1.33
NEDD9-203ENST00000397378 DNAH5Q8TE73 4624 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 SRRM2Q9UQ35 2752 aaKnown RBP6.74□□□□□ -1.33
NEDD9-203ENST00000397378 TMEM235A6NFC5 223 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 I3L2K1 104 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 ST8SIA3O43173 380 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 PPYP01298 95 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 C4BPBP20851 252 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 FCGR2CP31995 323 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 ERVK-16P61578 105 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 MZT2AQ6P582 158 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 FAM24BQ8N5W8 94 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 SYT8Q8NBV8 401 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 OR1P1Q8NH06 330 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 ENKURQ8TC29 256 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 ST8SIA2Q92186 375 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 GRAMD2BQ96HH9 432 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 TMEM56Q96MV1 263 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 CCDC90BQ9GZT6 254 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 SLC5A7Q9GZV3 580 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 TMEM14BQ9NUH8 114 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 SCN3BQ9NY72 215 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 TBC1D24Q9ULP9 559 aa6.74□□□□□ -1.33
NEDD9-203ENST00000397378 TRAV6A0A075B6T7 132 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 MARCH11A6NNE9 402 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 K7EQG2 157 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 SSX5O60225 188 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 SCGNO76038 276 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 APOHP02749 345 aaPredicted RBP6.73□□□□□ -1.33
NEDD9-203ENST00000397378 RAB3BP20337 219 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 NPY1RP25929 384 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 GNG2P59768 71 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 TOMM20LQ6UXN7 152 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 OR51H1Q8NH63 302 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 SLC25A46Q96AG3 418 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 FAM210BQ96KR6 192 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 MGLLQ99685 303 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 HINT2Q9BX68 163 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 DUSP21Q9H596 190 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 TMEM231Q9H6L2 316 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 FKBP11Q9NYL4 201 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 OR51B2Q9Y5P1 312 aa6.73□□□□□ -1.33
NEDD9-203ENST00000397378 GNG7O60262 68 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 SNAPC5O75971 98 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 MYL9P24844 172 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 F2RP25116 425 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 RPL11P62913 178 aaKnown RBP6.72□□□□□ -1.33
NEDD9-203ENST00000397378 RNF212Q495C1 297 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 SERTAD4-AS1Q5TG53 156 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 UBE2UQ5VVX9 321 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 ZNF818PQ6ZRF7 136 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 C6orf223Q8N319 242 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 ZNF114Q8NC26 417 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 BEST4Q8NFU0 473 aa6.72□□□□□ -1.33
NEDD9-203ENST00000397378 CLEC5AQ9NY25 188 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms