RNA–Protein interactions for RNA: ENST00000395978.7

BDNF-203, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,988 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-203ENST00000395978 PGPA6NDG6 321 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 DPRXA6NFQ7 191 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 HIST1H2BKO60814 126 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 HIST1H2BJP06899 126 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 STAG3L2P0CL84 134 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 STAG3L3P0CL85 134 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 HIST1H2BOP23527 126 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 HIST1H2BBP33778 126 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 GPX4P36969 197 aaPredicted RBP5.4□□□□□ -1.54
BDNF-203ENST00000395978 PPOXP50336 477 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 MFAP2P55001 183 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 HIST1H2BDP58876 126 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 HIST1H2BCP62807 126 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 EFNB3Q15768 340 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 HIST2H2BEQ16778 126 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.4□□□□□ -1.54
BDNF-203ENST00000395978 RNASEH2CQ8TDP1 164 aaKnown RBP5.4□□□□□ -1.54
BDNF-203ENST00000395978 HIST1H2BHQ93079 126 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 GAFA1Q96PS6 74 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 HIST1H2BNQ99877 126 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 HIST1H2BMQ99879 126 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 BET1LQ9NYM9 111 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 DMDP11532 3685 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 NUP210LQ5VU65 1888 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 P01737 135 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 WNT2P09544 360 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 CEACAM8P31997 349 aaPredicted RBP5.4□□□□□ -1.54
BDNF-203ENST00000395978 GATA4P43694 442 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 PKIAP61925 76 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 SLC35B1P78383 322 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 RELQ04864 619 aaPredicted RBP5.4□□□□□ -1.54
BDNF-203ENST00000395978 CD69Q07108 199 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 KLRB1Q12918 225 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 C3orf36Q3SXR2 165 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 CENPWQ5EE01 88 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 SMIM15Q7Z3B0 74 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 HAPLN4Q86UW8 402 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 PNKDQ8N490 385 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 OR4A5Q8NH83 315 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 NOL4LQ96MY1 436 aaPredicted RBP5.4□□□□□ -1.54
BDNF-203ENST00000395978 VAMP8Q9BV40 100 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 COL25A1Q9BXS0 654 aaPredicted RBP5.4□□□□□ -1.54
BDNF-203ENST00000395978 NCOR1P1Q9H4R4 102 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 FAM215AQ9Y5M1 114 aa5.4□□□□□ -1.54
BDNF-203ENST00000395978 C15orf65H3BRN8 121 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 TMEM178BH3BS89 294 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 COL8A1P27658 744 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 ADIPOQQ15848 244 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 TMEM183AQ8IXX5 376 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 IGLV3-9A0A075B6K5 115 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 TEX50A0A1B0GTY4 177 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 ZNF785A8K8V0 405 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 CD99P14209 185 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 TMEM200BQ69YZ2 307 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 Q6ZPA2 131 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 LURAP1LQ8IV03 231 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 FAM222BQ8WU58 562 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 WFIKKN1Q96NZ8 548 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 TMUB1Q9BVT8 246 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 TMEM133Q9H2Q1 129 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 DKK4Q9UBT3 224 aa5.4□□□□□ -1.55
BDNF-203ENST00000395978 ANKHD1Q8IWZ3 2542 aaKnown RBP5.4□□□□□ -1.55
BDNF-203ENST00000395978 EML5Q05BV3 1969 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 GCGP01275 180 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 C1QTNF9P0C862 333 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 PAFAH1B2P68402 229 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 OR5I1Q13606 314 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 FXYD3Q14802 87 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 TBR1Q16650 682 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 SLC25A48Q6ZT89 311 aaKnown RBP5.39□□□□□ -1.55
BDNF-203ENST00000395978 MGST2Q99735 147 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 MRPL18Q9H0U6 180 aaKnown RBP5.39□□□□□ -1.55
BDNF-203ENST00000395978 UBTD1Q9HAC8 227 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 CBY1Q9Y3M2 126 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.39□□□□□ -1.55
BDNF-203ENST00000395978 LOC105371242A0A075B767 164 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 A8MWL6 223 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 APCSP02743 223 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 RNASEKQ6P5S7 137 aaKnown RBP5.39□□□□□ -1.55
BDNF-203ENST00000395978 MED12LQ86YW9 2145 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 KLHDC1Q8N7A1 406 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 AGMATQ9BSE5 352 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 DPM3Q9P2X0 92 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 DMRT1Q9Y5R6 373 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 SERTM2A0A1B0GWG4 89 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 SLC17A3O00476 420 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 HLA-DQA1P01909 254 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 ZNF726P1Q15940 193 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 C2orf83Q53S99 150 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 IGF2-ASQ6U949 168 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 LINC00305Q7Z4B0 112 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 OR10W1Q8NGF6 305 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 OCC1Q8TAD7 63 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 ELOVL1Q9BW60 279 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 FBXL15Q9H469 300 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 GSN-AS1Q9NRJ2 163 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 IL36BQ9NZH7 164 aa5.39□□□□□ -1.55
BDNF-203ENST00000395978 PGPEP1LA6NFU8 196 aa5.38□□□□□ -1.55
BDNF-203ENST00000395978 LYNX1G3V0Z9 82 aa5.38□□□□□ -1.55
BDNF-203ENST00000395978 ISLRO14498 428 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms