RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 CX3CL1P78423 397 aa16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 ATP5G2Q06055 141 aa16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 TNFRSF14Q92956 283 aa16.26■□□□□ 0.19
TGFBR1-201ENST00000374990 FBLL1A6NHQ2 334 aaKnown RBP16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 DYNLRB2Q8TF09 96 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 PIMREGQ9BSJ6 248 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 TMEM133Q9H2Q1 129 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 GSN-AS1Q9NRJ2 163 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 OSTCQ9NRP0 149 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 K7ERU9 68 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 COLCA1Q6ZS62 124 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 A0A1B0GUT8 65 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 IGKV1-5P01602 117 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 C2orf83Q53S99 150 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 NEU1Q99519 415 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 C1QTNF9BB2RNN3 333 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 CHODLQ9H9P2 273 aa16.25■□□□□ 0.19
TGFBR1-201ENST00000374990 OR9G9P0C7N8 305 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 GATA2P23769 480 aaPredicted RBP16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 TEX29Q8N6K0 151 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 RNASE6Q93091 150 aaKnown RBP16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 WFIKKN1Q96NZ8 548 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 MED13LQ71F56 2210 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 DLX6P56179 175 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 A0A1B0GW15 77 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 TEX45Q8NA69 505 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 USF3Q68DE3 2245 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 FMC1Q96HJ9 113 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 HIST1H2BKO60814 126 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 HIST1H2BJP06899 126 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 HIST1H2BOP23527 126 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 HIST1H2BBP33778 126 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 HIST1H2BDP58876 126 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 HIST1H2BCP62807 126 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 EFNB3Q15768 340 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 HIST2H2BEQ16778 126 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 CIARTQ8N365 385 aaPredicted RBP16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 HIST1H2BHQ93079 126 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 HIST1H2BNQ99877 126 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 HIST1H2BMQ99879 126 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 PHLDA3Q9Y5J5 127 aa16.24■□□□□ 0.19
TGFBR1-201ENST00000374990 IGHV1-46P01743 117 aa16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 BTF3P20290 206 aaKnown RBP16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 RNFT1Q5M7Z0 435 aa16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 PPP1R27Q86WC6 154 aa16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 C1orf147Q96MC9 270 aaPredicted RBP16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 CBLN4Q9NTU7 201 aa16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 SIAH2O43255 324 aa16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 RPP25LQ8N5L8 163 aaKnown RBP16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 EAF1Q96JC9 268 aaPredicted RBP16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 UBE2CO00762 179 aa16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 STAG3L2P0CL84 134 aa16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 STAG3L3P0CL85 134 aa16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 HTN1P15515 57 aa16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 ATP5J2P56134 94 aa16.23■□□□□ 0.19
TGFBR1-201ENST00000374990 FOXA3P55318 350 aaPredicted RBP16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 TREML4Q6UXN2 200 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 HINT1P49773 126 aaPredicted RBP16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 ZNF841Q6ZN19 808 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 RPP21Q9H633 154 aaKnown RBP16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 ANAPC10Q9UM13 185 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 IGKV1D-33P01593 117 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 IGKV1-33P01594 117 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 C1QL4Q86Z23 238 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 IZUMO1RA6ND01 250 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 IGHG3P01860 377 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 C1QTNF9P0C862 333 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 Q6P435 159 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 TMEM136Q6ZRR5 245 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 SYT8Q8NBV8 401 aa16.22■□□□□ 0.19
TGFBR1-201ENST00000374990 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.21■□□□□ 0.19
TGFBR1-201ENST00000374990 GGTLC1Q9BX51 225 aa16.21■□□□□ 0.19
TGFBR1-201ENST00000374990 TCRBV4S1A1TA0A5B7 111 aa16.21■□□□□ 0.19
TGFBR1-201ENST00000374990 E9PLN8 166 aa16.21■□□□□ 0.19
TGFBR1-201ENST00000374990 IMMP2LQ96T52 175 aa16.21■□□□□ 0.19
TGFBR1-201ENST00000374990 VKORC1Q9BQB6 163 aa16.21■□□□□ 0.19
TGFBR1-201ENST00000374990 SLC25A15Q9Y619 301 aa16.21■□□□□ 0.19
TGFBR1-201ENST00000374990 GLRX5Q86SX6 157 aa16.21■□□□□ 0.19
TGFBR1-201ENST00000374990 FBXL7Q9UJT9 491 aa16.21■□□□□ 0.19
TGFBR1-201ENST00000374990 FOXA2Q9Y261 457 aaPredicted RBP16.21■□□□□ 0.19
TGFBR1-201ENST00000374990 HGFACQ04756 655 aa16.21■□□□□ 0.18
TGFBR1-201ENST00000374990 SMAGPQ0VAQ4 97 aa16.21■□□□□ 0.18
TGFBR1-201ENST00000374990 TBL2Q9Y4P3 447 aaKnown RBP16.21■□□□□ 0.18
TGFBR1-201ENST00000374990 PSMG4Q5JS54 123 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 SOD3P08294 240 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 TEX38Q6PEX7 206 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 WNT10AQ9GZT5 417 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 AUP1Q9Y679 476 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 BDP1A6H8Y1 2624 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 IGHV3-35A0A0C4DH35 117 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 TMEM238LA0A1B0GVL6 79 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 A6NJY4 79 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 PVRIGQ6DKI7 326 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 TMEM190Q8WZ59 177 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 ARPC1AQ92747 370 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 PLXNA2O75051 1894 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 NBR2O15453 112 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 VSIRQ9H7M9 311 aa16.2■□□□□ 0.18
TGFBR1-201ENST00000374990 CGB1A6NKQ9 187 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms