RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 ZNF486Q96H40 463 aaPredicted RBP12.56□□□□□ -0.4
VSTM1-201ENST00000338372 MIXL1Q9H2W2 232 aa12.56□□□□□ -0.4
VSTM1-201ENST00000338372 MTFP1Q9UDX5 166 aa12.56□□□□□ -0.4
VSTM1-201ENST00000338372 AGRNO00468 2067 aa12.56□□□□□ -0.4
VSTM1-201ENST00000338372 A0A0G2JRQ6 117 aa12.55□□□□□ -0.4
VSTM1-201ENST00000338372 APOHP02749 345 aaPredicted RBP12.55□□□□□ -0.4
VSTM1-201ENST00000338372 CD74P04233 296 aa12.55□□□□□ -0.4
VSTM1-201ENST00000338372 ATF4P18848 351 aaPredicted RBP12.55□□□□□ -0.4
VSTM1-201ENST00000338372 LYG2Q86SG7 212 aa12.55□□□□□ -0.4
VSTM1-201ENST00000338372 APRG1Q8IVJ8 170 aa12.55□□□□□ -0.4
VSTM1-201ENST00000338372 TMEM116Q8NCL8 245 aa12.55□□□□□ -0.4
VSTM1-201ENST00000338372 MISP3Q96FF7 219 aa12.55□□□□□ -0.4
VSTM1-201ENST00000338372 GALNT14Q96FL9 552 aa12.55□□□□□ -0.4
VSTM1-201ENST00000338372 VSIRQ9H7M9 311 aa12.55□□□□□ -0.4
VSTM1-201ENST00000338372 ZFAND3Q9H8U3 227 aa12.55□□□□□ -0.4
VSTM1-201ENST00000338372 MRPL36Q9P0J6 103 aaKnown RBP12.55□□□□□ -0.4
VSTM1-201ENST00000338372 IGHV3-49A0A0A0MS15 119 aa12.54□□□□□ -0.4
VSTM1-201ENST00000338372 OR4C46A6NHA9 309 aa12.54□□□□□ -0.4
VSTM1-201ENST00000338372 NUPL2O15504 423 aaKnown RBP12.54□□□□□ -0.4
VSTM1-201ENST00000338372 ZNF182P17025 639 aaPredicted RBP12.54□□□□□ -0.4
VSTM1-201ENST00000338372 BMI1P35226 326 aa12.54□□□□□ -0.4
VSTM1-201ENST00000338372 APOC4P55056 127 aa12.54□□□□□ -0.4
VSTM1-201ENST00000338372 PIGPP57054 158 aa12.54□□□□□ -0.4
VSTM1-201ENST00000338372 RELQ04864 619 aaPredicted RBP12.54□□□□□ -0.4
VSTM1-201ENST00000338372 BSXQ3C1V8 233 aa12.54□□□□□ -0.4
VSTM1-201ENST00000338372 SPINK9Q5DT21 86 aa12.54□□□□□ -0.4
VSTM1-201ENST00000338372 TOMM20LQ6UXN7 152 aa12.54□□□□□ -0.4
VSTM1-201ENST00000338372 Q6ZRM9 215 aa12.54□□□□□ -0.4
VSTM1-201ENST00000338372 ARRDC1Q8N5I2 433 aa12.54□□□□□ -0.4
VSTM1-201ENST00000338372 LINC00476Q8WZB0 136 aa12.54□□□□□ -0.4
VSTM1-201ENST00000338372 FNDC4Q9H6D8 234 aaPredicted RBP12.54□□□□□ -0.4
VSTM1-201ENST00000338372 FRAS1Q86XX4 4008 aa12.53□□□□□ -0.4
VSTM1-201ENST00000338372 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
VSTM1-201ENST00000338372 TMEM50AO95807 157 aa12.53□□□□□ -0.4
VSTM1-201ENST00000338372 RNASE2P10153 161 aaKnown RBP12.53□□□□□ -0.4
VSTM1-201ENST00000338372 RPL35AP18077 110 aaKnown RBP12.53□□□□□ -0.4
VSTM1-201ENST00000338372 AARDQ4LEZ3 155 aa12.53□□□□□ -0.4
VSTM1-201ENST00000338372 RNASE12Q5GAN4 147 aaKnown RBP12.53□□□□□ -0.4
VSTM1-201ENST00000338372 IGHV3OR16-13A0A075B7E8 117 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 TRAV14DV4A0A0A6YYC5 116 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 IGHV3-74A0A0B4J1X5 117 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 C3orf85A0A1B0GTC6 90 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 A0A1B0GU03 582 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 UCP1P25874 307 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 S100GP29377 79 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 ERHP84090 104 aaKnown RBP12.52□□□□□ -0.41
VSTM1-201ENST00000338372 MLANAQ16655 118 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 TMEM229BQ8NBD8 167 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 TERB2Q8NHR7 220 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 ST8SIA2Q92186 375 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 EXTL2Q9UBQ6 330 aa12.52□□□□□ -0.41
VSTM1-201ENST00000338372 FAM25AB3EWG3 89 aa12.51□□□□□ -0.41
VSTM1-201ENST00000338372 FAM25CB3EWG5 89 aa12.51□□□□□ -0.41
VSTM1-201ENST00000338372 FAM25GB3EWG6 89 aa12.51□□□□□ -0.41
VSTM1-201ENST00000338372 TBPP20226 339 aa12.51□□□□□ -0.41
VSTM1-201ENST00000338372 SP6Q3SY56 376 aa12.51□□□□□ -0.41
VSTM1-201ENST00000338372 RNASE10Q5GAN6 216 aaKnown RBP12.51□□□□□ -0.41
VSTM1-201ENST00000338372 MZT2AQ6P582 158 aa12.51□□□□□ -0.41
VSTM1-201ENST00000338372 STPG3Q8N7X2 389 aa12.51□□□□□ -0.41
VSTM1-201ENST00000338372 OR13C8Q8NGS7 320 aa12.51□□□□□ -0.41
VSTM1-201ENST00000338372 LHFPL5Q8TAF8 219 aa12.51□□□□□ -0.41
VSTM1-201ENST00000338372 PINX1Q96BK5 328 aaKnown RBP12.51□□□□□ -0.41
VSTM1-201ENST00000338372 RTBDNQ9BSG5 229 aaPredicted RBP12.51□□□□□ -0.41
VSTM1-201ENST00000338372 GNG7O60262 68 aa12.5□□□□□ -0.41
VSTM1-201ENST00000338372 YIF1AO95070 293 aa12.5□□□□□ -0.41
VSTM1-201ENST00000338372 PGAM2P15259 253 aa12.5□□□□□ -0.41
VSTM1-201ENST00000338372 ETV6P41212 452 aa12.5□□□□□ -0.41
VSTM1-201ENST00000338372 ALDH3B2P48448 385 aa12.5□□□□□ -0.41
VSTM1-201ENST00000338372 GPR107Q5VW38 600 aa12.5□□□□□ -0.41
VSTM1-201ENST00000338372 CEMP1Q6PRD7 247 aaPredicted RBP12.5□□□□□ -0.41
VSTM1-201ENST00000338372 FAM24BQ8N5W8 94 aa12.5□□□□□ -0.41
VSTM1-201ENST00000338372 GLYATL2Q8WU03 294 aa12.5□□□□□ -0.41
VSTM1-201ENST00000338372 CTDSP2O14595 271 aa12.49□□□□□ -0.41
VSTM1-201ENST00000338372 CDS2O95674 445 aa12.49□□□□□ -0.41
VSTM1-201ENST00000338372 TCF24Q7RTU0 167 aa12.49□□□□□ -0.41
VSTM1-201ENST00000338372 MARCH1Q8TCQ1 289 aa12.49□□□□□ -0.41
VSTM1-201ENST00000338372 CSTL1Q9H114 145 aa12.49□□□□□ -0.41
VSTM1-201ENST00000338372 PUS1Q9Y606 427 aaKnown RBP eCLIP12.49□□□□□ -0.41
VSTM1-201ENST00000338372 VPS13DQ5THJ4 4388 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 GABARAPH6UMI1 98 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 DFFBO76075 338 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 IGKV1-17P01599 117 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 GIG44P09565 113 aaPredicted RBP12.48□□□□□ -0.41
VSTM1-201ENST00000338372 RPL5P46777 297 aaKnown RBP12.48□□□□□ -0.41
VSTM1-201ENST00000338372 NPBWR1P48145 328 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 TFPI2P48307 235 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 PPP5CP53041 499 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 PMS2P11Q13670 270 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 STEAP1BQ6NZ63 245 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 ZNF600Q6ZNG1 722 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 GBGT1Q8N5D6 347 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 DUSP18Q8NEJ0 188 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 TMEM170AQ8WVE7 144 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 MS4A6AQ9H2W1 248 aa12.48□□□□□ -0.41
VSTM1-201ENST00000338372 IGKV3-7A0A075B6H7 116 aa12.47□□□□□ -0.41
VSTM1-201ENST00000338372 NUPR2A6NF83 97 aa12.47□□□□□ -0.41
VSTM1-201ENST00000338372 CLN5O75503 358 aa12.47□□□□□ -0.41
VSTM1-201ENST00000338372 RAB3DO95716 219 aa12.47□□□□□ -0.41
VSTM1-201ENST00000338372 CMC4P56277 68 aaPredicted RBP12.47□□□□□ -0.41
VSTM1-201ENST00000338372 SPCS2Q15005 226 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms