RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 CCDC59Q9P031 241 aaKnown RBP12.85□□□□□ -0.35
EXOSC4-201ENST00000316052 IGHV3OR16-13A0A075B7E8 117 aa12.84□□□□□ -0.35
EXOSC4-201ENST00000316052 IGHV3-74A0A0B4J1X5 117 aa12.84□□□□□ -0.35
EXOSC4-201ENST00000316052 YIF1AO95070 293 aa12.84□□□□□ -0.35
EXOSC4-201ENST00000316052 TFPI2P48307 235 aa12.84□□□□□ -0.35
EXOSC4-201ENST00000316052 MFAP4P55083 255 aa12.84□□□□□ -0.35
EXOSC4-201ENST00000316052 LSM3P62310 102 aaKnown RBP12.84□□□□□ -0.35
EXOSC4-201ENST00000316052 FAM90A2PQ658T7 463 aa12.84□□□□□ -0.35
EXOSC4-201ENST00000316052 RPP25LQ8N5L8 163 aaKnown RBP12.84□□□□□ -0.35
EXOSC4-201ENST00000316052 KLK5Q9Y337 293 aaPredicted RBP12.84□□□□□ -0.35
EXOSC4-201ENST00000316052 DNAH6Q9C0G6 4158 aa12.84□□□□□ -0.35
EXOSC4-201ENST00000316052 IGKV3-7A0A075B6H7 116 aa12.83□□□□□ -0.36
EXOSC4-201ENST00000316052 NUPL2O15504 423 aaKnown RBP12.83□□□□□ -0.36
EXOSC4-201ENST00000316052 EIF4EP06730 217 aaKnown RBP12.83□□□□□ -0.36
EXOSC4-201ENST00000316052 RELQ04864 619 aaPredicted RBP12.83□□□□□ -0.36
EXOSC4-201ENST00000316052 TBC1D26Q86UD7 250 aa12.83□□□□□ -0.36
EXOSC4-201ENST00000316052 GPX8Q8TED1 209 aa12.83□□□□□ -0.36
EXOSC4-201ENST00000316052 PHLDA1Q8WV24 401 aaPredicted RBP12.83□□□□□ -0.36
EXOSC4-201ENST00000316052 NXF2Q9GZY0 626 aaKnown RBP12.83□□□□□ -0.36
EXOSC4-201ENST00000316052 CSTL1Q9H114 145 aa12.83□□□□□ -0.36
EXOSC4-201ENST00000316052 AGRNO00468 2067 aa12.83□□□□□ -0.36
EXOSC4-201ENST00000316052 TRAV14DV4A0A0A6YYC5 116 aa12.82□□□□□ -0.36
EXOSC4-201ENST00000316052 MT-CO2P00403 227 aa12.82□□□□□ -0.36
EXOSC4-201ENST00000316052 LILRB2Q8N423 598 aa12.82□□□□□ -0.36
EXOSC4-201ENST00000316052 GBGT1Q8N5D6 347 aa12.82□□□□□ -0.36
EXOSC4-201ENST00000316052 TMEM217Q8N7C4 229 aa12.82□□□□□ -0.36
EXOSC4-201ENST00000316052 OR4A16Q8NH70 328 aa12.82□□□□□ -0.36
EXOSC4-201ENST00000316052 TXN2Q99757 166 aa12.82□□□□□ -0.36
EXOSC4-201ENST00000316052 FAM212BQ9NTI7 297 aaPredicted RBP12.82□□□□□ -0.36
EXOSC4-201ENST00000316052 HERC2O95714 4834 aa12.81□□□□□ -0.36
EXOSC4-201ENST00000316052 MPTX1A8MV57 137 aa12.81□□□□□ -0.36
EXOSC4-201ENST00000316052 HSPE1P61604 102 aaKnown RBP12.81□□□□□ -0.36
EXOSC4-201ENST00000316052 TSPAN5P62079 268 aa12.81□□□□□ -0.36
EXOSC4-201ENST00000316052 PRCDQ00LT1 54 aa12.81□□□□□ -0.36
EXOSC4-201ENST00000316052 IZUMO4Q1ZYL8 232 aa12.81□□□□□ -0.36
EXOSC4-201ENST00000316052 LPCAT3Q6P1A2 487 aa12.81□□□□□ -0.36
EXOSC4-201ENST00000316052 H2BFWTQ7Z2G1 175 aa12.81□□□□□ -0.36
EXOSC4-201ENST00000316052 ZNF114Q8NC26 417 aa12.81□□□□□ -0.36
EXOSC4-201ENST00000316052 SLIRPQ9GZT3 109 aaKnown RBP12.81□□□□□ -0.36
EXOSC4-201ENST00000316052 C6orf62Q9GZU0 229 aaPredicted RBP12.81□□□□□ -0.36
EXOSC4-201ENST00000316052 APOHP02749 345 aaPredicted RBP12.8□□□□□ -0.36
EXOSC4-201ENST00000316052 CMC4P56277 68 aaPredicted RBP12.8□□□□□ -0.36
EXOSC4-201ENST00000316052 SPINK9Q5DT21 86 aa12.8□□□□□ -0.36
EXOSC4-201ENST00000316052 TOMM20LQ6UXN7 152 aa12.8□□□□□ -0.36
EXOSC4-201ENST00000316052 MRGPRFQ96AM1 343 aa12.8□□□□□ -0.36
EXOSC4-201ENST00000316052 PINX1Q96BK5 328 aaKnown RBP12.8□□□□□ -0.36
EXOSC4-201ENST00000316052 RARRES2Q99969 163 aa12.8□□□□□ -0.36
EXOSC4-201ENST00000316052 DEDDO75618 318 aa12.79□□□□□ -0.36
EXOSC4-201ENST00000316052 UCP3P55916 312 aa12.79□□□□□ -0.36
EXOSC4-201ENST00000316052 NANOS2P60321 138 aaKnown RBP12.79□□□□□ -0.36
EXOSC4-201ENST00000316052 TCF24Q7RTU0 167 aa12.79□□□□□ -0.36
EXOSC4-201ENST00000316052 SNX29P2Q8IUI4 249 aa12.79□□□□□ -0.36
EXOSC4-201ENST00000316052 OR11H2Q8NH07 326 aa12.79□□□□□ -0.36
EXOSC4-201ENST00000316052 GATAD1Q8WUU5 269 aa12.79□□□□□ -0.36
EXOSC4-201ENST00000316052 ST8SIA2Q92186 375 aa12.79□□□□□ -0.36
EXOSC4-201ENST00000316052 COMMD3Q9UBI1 195 aa12.79□□□□□ -0.36
EXOSC4-201ENST00000316052 HECTD4Q9Y4D8 3996 aa12.79□□□□□ -0.36
EXOSC4-201ENST00000316052 GNG7O60262 68 aa12.78□□□□□ -0.36
EXOSC4-201ENST00000316052 S100GP29377 79 aa12.78□□□□□ -0.36
EXOSC4-201ENST00000316052 ERHP84090 104 aaKnown RBP12.78□□□□□ -0.36
EXOSC4-201ENST00000316052 S100ZQ8WXG8 99 aa12.78□□□□□ -0.36
EXOSC4-201ENST00000316052 CMTM3Q96MX0 182 aa12.78□□□□□ -0.36
EXOSC4-201ENST00000316052 VSIRQ9H7M9 311 aa12.78□□□□□ -0.36
EXOSC4-201ENST00000316052 IGHV3-66A0A0C4DH42 116 aa12.77□□□□□ -0.37
EXOSC4-201ENST00000316052 M0QYG6 137 aa12.77□□□□□ -0.37
EXOSC4-201ENST00000316052 DFFBO76075 338 aa12.77□□□□□ -0.37
EXOSC4-201ENST00000316052 IGKV1-5P01602 117 aa12.77□□□□□ -0.37
EXOSC4-201ENST00000316052 APOA1P02647 267 aa12.77□□□□□ -0.37
EXOSC4-201ENST00000316052 RORCP51449 518 aa12.77□□□□□ -0.37
EXOSC4-201ENST00000316052 LGALS9CQ6DKI2 356 aa12.77□□□□□ -0.37
EXOSC4-201ENST00000316052 FAM24BQ8N5W8 94 aa12.77□□□□□ -0.37
EXOSC4-201ENST00000316052 MCFD2Q8NI22 146 aa12.77□□□□□ -0.37
EXOSC4-201ENST00000316052 MS4A6AQ9H2W1 248 aa12.77□□□□□ -0.37
EXOSC4-201ENST00000316052 SCPEP1Q9HB40 452 aa12.77□□□□□ -0.37
EXOSC4-201ENST00000316052 A0A0B4J293 547 aa12.76□□□□□ -0.37
EXOSC4-201ENST00000316052 DEFB4AO15263 64 aa12.76□□□□□ -0.37
EXOSC4-201ENST00000316052 ELK1P19419 428 aa12.76□□□□□ -0.37
EXOSC4-201ENST00000316052 PI3P19957 117 aa12.76□□□□□ -0.37
EXOSC4-201ENST00000316052 LEMD1Q68G75 181 aa12.76□□□□□ -0.37
EXOSC4-201ENST00000316052 C11orf45Q8TAV5 145 aa12.76□□□□□ -0.37
EXOSC4-201ENST00000316052 GINS3Q9BRX5 216 aa12.76□□□□□ -0.37
EXOSC4-201ENST00000316052 KRTAP17-1Q9BYP8 105 aa12.76□□□□□ -0.37
EXOSC4-201ENST00000316052 ZFAND3Q9H8U3 227 aa12.76□□□□□ -0.37
EXOSC4-201ENST00000316052 FBXL17Q9UF56 701 aa12.76□□□□□ -0.37
EXOSC4-201ENST00000316052 PUS1Q9Y606 427 aaKnown RBP eCLIP12.76□□□□□ -0.37
EXOSC4-201ENST00000316052 A0A1B0GU03 582 aa12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 ST8SIA3O43173 380 aa12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 TMEM50AO95807 157 aa12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 P0C879 139 aa12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 RCVRNP35243 200 aa12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 DEFB131AP59861 70 aa12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 PAFAH1B2P68402 229 aa12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 PVRIGQ6DKI7 326 aa12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 DUSP18Q8NEJ0 188 aa12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 WDR12Q9GZL7 423 aaKnown RBP12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 C11orf68Q9H3H3 251 aaKnown RBP12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 MRPL36Q9P0J6 103 aaKnown RBP12.75□□□□□ -0.37
EXOSC4-201ENST00000316052 DNASE2O00115 360 aaPredicted RBP12.74□□□□□ -0.37
EXOSC4-201ENST00000316052 HPGDSO60760 199 aa12.74□□□□□ -0.37
EXOSC4-201ENST00000316052 CA1P00915 261 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms