RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SIX6O95475 246 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 TMEM50AO95807 157 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 LGALS1P09382 135 aaKnown RBP10.93□□□□□ -0.66
VPS25-201ENST00000253794 NPY1RP25929 384 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 FCGR2BP31994 310 aaPredicted RBP10.93□□□□□ -0.66
VPS25-201ENST00000253794 PAX9P55771 341 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 C15orf32Q32M92 178 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 C11orf87Q6NUJ2 197 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 ZNF343Q6P1L6 599 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 RNASEH2CQ8TDP1 164 aaKnown RBP10.93□□□□□ -0.66
VPS25-201ENST00000253794 CXorf58Q96LI9 332 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 GNB4Q9HAV0 340 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 FBXL7Q9UJT9 491 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 TRRAPQ9Y4A5 3859 aa10.93□□□□□ -0.66
VPS25-201ENST00000253794 C15orf62A8K5M9 175 aa10.92□□□□□ -0.66
VPS25-201ENST00000253794 WRBO00258 174 aa10.92□□□□□ -0.66
VPS25-201ENST00000253794 TSC22D2O75157 780 aa10.92□□□□□ -0.66
VPS25-201ENST00000253794 RPP30P78346 268 aaKnown RBP10.92□□□□□ -0.66
VPS25-201ENST00000253794 ATP5G2Q06055 141 aa10.92□□□□□ -0.66
VPS25-201ENST00000253794 RAB32Q13637 225 aa10.92□□□□□ -0.66
VPS25-201ENST00000253794 EXOSC2Q13868 293 aaKnown RBP10.92□□□□□ -0.66
VPS25-201ENST00000253794 SLC25A24Q6NUK1 477 aa10.92□□□□□ -0.66
VPS25-201ENST00000253794 SSSCA1O60232 199 aa10.91□□□□□ -0.66
VPS25-201ENST00000253794 SCGB1D2O95969 90 aa10.91□□□□□ -0.66
VPS25-201ENST00000253794 IFNA10P01566 189 aa10.91□□□□□ -0.66
VPS25-201ENST00000253794 GIPP09681 153 aaPredicted RBP10.91□□□□□ -0.66
VPS25-201ENST00000253794 IAPPP10997 89 aa10.91□□□□□ -0.66
VPS25-201ENST00000253794 FHL3Q13643 280 aa10.91□□□□□ -0.66
VPS25-201ENST00000253794 C18orf65Q6ZTR6 163 aa10.91□□□□□ -0.66
VPS25-201ENST00000253794 KLHL30-AS1Q8NEE0 82 aa10.91□□□□□ -0.66
VPS25-201ENST00000253794 ZNF502Q8TBZ5 544 aa10.91□□□□□ -0.66
VPS25-201ENST00000253794 PPP1R1CQ8WVI7 109 aa10.91□□□□□ -0.66
VPS25-201ENST00000253794 OR4C12Q96R67 309 aa10.91□□□□□ -0.66
VPS25-201ENST00000253794 ZNF436Q9C0F3 470 aaPredicted RBP10.91□□□□□ -0.66
VPS25-201ENST00000253794 VWFP04275 2813 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.9□□□□□ -0.66
VPS25-201ENST00000253794 TRBV7-1A0A0A6YYK4 115 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 MFSD2BA6NFX1 497 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 PRSS46E5RG02 174 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 DEDDO75618 318 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 MT-CO2P00403 227 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 DEFA5Q01523 94 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 KHDC1LQ5JSQ8 128 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 HIST2H2BDQ6DRA6 164 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 TMEM14EPQ6UXP3 125 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 SCARB1Q8WTV0 552 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 EEF1AKMT3Q96AZ1 226 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 WDR89Q96FK6 387 aaPredicted RBP10.9□□□□□ -0.66
VPS25-201ENST00000253794 CCDC140Q96MF4 163 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 TXN2Q99757 166 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 FNDC4Q9H6D8 234 aaPredicted RBP10.9□□□□□ -0.66
VPS25-201ENST00000253794 PSENENQ9NZ42 101 aa10.9□□□□□ -0.66
VPS25-201ENST00000253794 STRAPQ9Y3F4 350 aaKnown RBP10.9□□□□□ -0.66
VPS25-201ENST00000253794 F8W735 103 aaPredicted RBP10.89□□□□□ -0.67
VPS25-201ENST00000253794 H0YIZ8 118 aa10.89□□□□□ -0.67
VPS25-201ENST00000253794 M0QZ24 198 aa10.89□□□□□ -0.67
VPS25-201ENST00000253794 PVALBP20472 110 aaPredicted RBP10.89□□□□□ -0.67
VPS25-201ENST00000253794 RAP2BP61225 183 aa10.89□□□□□ -0.67
VPS25-201ENST00000253794 RAB11AP62491 216 aa10.89□□□□□ -0.67
VPS25-201ENST00000253794 ETV3LQ6ZN32 361 aa10.89□□□□□ -0.67
VPS25-201ENST00000253794 OR4F17Q8NGA8 305 aa10.89□□□□□ -0.67
VPS25-201ENST00000253794 CHAC2Q8WUX2 184 aa10.89□□□□□ -0.67
VPS25-201ENST00000253794 MISP3Q96FF7 219 aa10.89□□□□□ -0.67
VPS25-201ENST00000253794 OR4F4Q96R69 305 aa10.89□□□□□ -0.67
VPS25-201ENST00000253794 LYRM2Q9NU23 88 aaPredicted RBP10.89□□□□□ -0.67
VPS25-201ENST00000253794 C21orf62Q9NYP8 219 aa10.89□□□□□ -0.67
VPS25-201ENST00000253794 LSM5Q9Y4Y9 91 aaKnown RBP10.89□□□□□ -0.67
VPS25-201ENST00000253794 RPS10-NUDT3A0A1W2PQS6 291 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 PMS2P5A8MQ11 134 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 NUDT19A8MXV4 375 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 SCAF4O95104 1147 aaKnown RBP10.88□□□□□ -0.67
VPS25-201ENST00000253794 MPC2O95563 127 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 IGHV3-11P01762 117 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 RLN2P04090 185 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 OR8U8P0C7N1 319 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 PET100P0DJ07 73 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 SLC25A4P12235 298 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 LYL1P12980 280 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 GPX4P36969 197 aaPredicted RBP10.88□□□□□ -0.67
VPS25-201ENST00000253794 S100A10P60903 97 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 CD69Q07108 199 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 NSUN5P1Q3KNT7 163 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 SPANXN5Q5MJ07 72 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 ETFRF1Q6IPR1 90 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 PRSS54Q6PEW0 395 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 C8orf86Q6ZUL3 223 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 CACNG8Q8WXS5 425 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 RAX2Q96IS3 184 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 RNF126Q9BV68 326 aa10.88□□□□□ -0.67
VPS25-201ENST00000253794 RANGRFQ9HD47 186 aaPredicted RBP10.88□□□□□ -0.67
VPS25-201ENST00000253794 GAR1Q9NY12 217 aaKnown RBP10.88□□□□□ -0.67
VPS25-201ENST00000253794 PEF1Q9UBV8 284 aaKnown RBP10.88□□□□□ -0.67
VPS25-201ENST00000253794 A0A1W2PRX2 142 aa10.87□□□□□ -0.67
VPS25-201ENST00000253794 E5RGE8 158 aa10.87□□□□□ -0.67
VPS25-201ENST00000253794 H3BP45 60 aa10.87□□□□□ -0.67
VPS25-201ENST00000253794 L7N2F9 121 aa10.87□□□□□ -0.67
VPS25-201ENST00000253794 HSPB1P04792 205 aaKnown RBP10.87□□□□□ -0.67
VPS25-201ENST00000253794 MYCNOSP40205 109 aa10.87□□□□□ -0.67
VPS25-201ENST00000253794 OPRK1P41145 380 aa10.87□□□□□ -0.67
VPS25-201ENST00000253794 MFAP4P55083 255 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms