RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 C10orf142B7Z368 130 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 H3BTX0 84 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 NPY1RP25929 384 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 FKBP2P26885 142 aaKnown RBP11.38□□□□□ -0.59
SCARB2-227ENST00000640957 Q5PR19 223 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 IBA57Q5T440 356 aaKnown RBP11.38□□□□□ -0.59
SCARB2-227ENST00000640957 OR4A16Q8NH70 328 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 C18orf32Q8TCD1 76 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 ZNF331Q9NQX6 463 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-227ENST00000640957 NAV3Q8IVL0 2385 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 C6orf15Q6UXA7 325 aaPredicted RBP11.38□□□□□ -0.59
SCARB2-227ENST00000640957 TMEM116Q8NCL8 245 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 OR4F17Q8NGA8 305 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 OR52E5Q8NH55 327 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 AKAP6Q13023 2319 aa11.38□□□□□ -0.59
SCARB2-227ENST00000640957 INTS1Q8N201 2190 aaKnown RBP11.37□□□□□ -0.59
SCARB2-227ENST00000640957 CEP295Q9C0D2 2601 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 IGLC7A0M8Q6 106 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 TOX4O94842 621 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 DKK1O94907 266 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 Q0VFX4 171 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 GDF5OSQ5U4N7 250 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 SPOCK3Q9BQ16 436 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 ZPBPQ9BS86 351 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 WDR54Q9H977 334 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 MED13LQ71F56 2210 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 FAM181BA6NEQ2 426 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 TIGITQ495A1 244 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 ZNF497Q6ZNH5 498 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 ZNF645Q8N7E2 425 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 NUDT10Q8NFP7 164 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 RNF138Q8WVD3 245 aa11.37□□□□□ -0.59
SCARB2-227ENST00000640957 BOKQ9UMX3 212 aaPredicted RBP11.37□□□□□ -0.59
SCARB2-227ENST00000640957 TRIP6Q15654 476 aaKnown RBP11.36□□□□□ -0.59
SCARB2-227ENST00000640957 ZNF718Q3SXZ3 478 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 PPP1R32Q7Z5V6 425 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 ASCL2Q99929 193 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 FNDC4Q9H6D8 234 aaPredicted RBP11.36□□□□□ -0.59
SCARB2-227ENST00000640957 TET2Q6N021 2002 aaPredicted RBP11.36□□□□□ -0.59
SCARB2-227ENST00000640957 CUL9Q8IWT3 2517 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 TRAV8-6A0A0B4J262 113 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 OR4C46A6NHA9 309 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 PPIAL4DF5H284 164 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 M0R1X1 148 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 TMEM11P17152 192 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 B3GALT5-AS1P59052 145 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 CATR1Q13166 79 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 TMEM164Q5U3C3 297 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 SPSB4Q96A44 273 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 PRDM14Q9GZV8 571 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 IGHV2-26A0A0B4J1V2 119 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 ZNF207O43670 478 aaKnown RBP11.36□□□□□ -0.59
SCARB2-227ENST00000640957 APOA2P02652 100 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 CX3CL1P78423 397 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 NUDT11Q96G61 164 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 GNB1LQ9BYB4 327 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 B4GALT7Q9UBV7 327 aa11.36□□□□□ -0.59
SCARB2-227ENST00000640957 LSM4Q9Y4Z0 139 aaKnown RBP11.36□□□□□ -0.59
SCARB2-227ENST00000640957 TRAV9-2A0A087WT02 112 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A10PA6NDY2 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A18PA6NE21 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A16PA6NEW6 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A20PA6NIJ5 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A8PA6NJQ4 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A7PA6NKC0 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A22PA8MWA6 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A12PA8MX19 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A5PA8MXJ8 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A23PA8MXZ1 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 K7EP13 123 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A15PP0C7V4 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A13PP0C7W8 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A14PP0C7W9 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FAM90A24PP0C7X0 464 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 C1orf210Q8IVY1 113 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 SPACA3Q8IXA5 215 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 CNEP1R1Q8N9A8 125 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 OR13A1Q8NGR1 328 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 RAB37Q96AX2 223 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 OBP2BQ9NPH6 170 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 CEP192Q8TEP8 1941 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 KMT2EQ8IZD2 1858 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 GAGE12BA1L429 117 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 FBLL1A6NHQ2 334 aaKnown RBP11.35□□□□□ -0.59
SCARB2-227ENST00000640957 TAX1BP3O14907 124 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 TOMM40O96008 361 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 ESDP10768 282 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 OR1C1Q15619 314 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 VWC2Q2TAL6 325 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 MORN5Q5VZ52 161 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 C1orf159Q96HA4 380 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 GNG12Q9UBI6 72 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 APC2O95996 2303 aa11.35□□□□□ -0.59
SCARB2-227ENST00000640957 UBE2G1P62253 170 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 ARG2P78540 354 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 PSG9Q00887 426 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 FOXF2Q12947 444 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 RNF212BA8MTL3 300 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 HAND1O96004 215 aa11.34□□□□□ -0.59
SCARB2-227ENST00000640957 TCF24Q7RTU0 167 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms