RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 GNRHRP30968 328 aa13.22□□□□□ -0.29
MKS1-209ENST00000580127 LPAR6P43657 344 aa13.22□□□□□ -0.29
MKS1-209ENST00000580127 TCTAP57738 103 aa13.22□□□□□ -0.29
MKS1-209ENST00000580127 RBMS2Q15434 407 aaKnown RBP13.22□□□□□ -0.29
MKS1-209ENST00000580127 ZNF773Q6PK81 442 aa13.22□□□□□ -0.29
MKS1-209ENST00000580127 DHRS11Q6UWP2 260 aa13.22□□□□□ -0.29
MKS1-209ENST00000580127 SPARTQ8N0X7 666 aa13.22□□□□□ -0.29
MKS1-209ENST00000580127 C11orf45Q8TAV5 145 aa13.22□□□□□ -0.29
MKS1-209ENST00000580127 DGCR14Q96DF8 476 aaKnown RBP13.22□□□□□ -0.29
MKS1-209ENST00000580127 S100A16Q96FQ6 103 aaKnown RBP13.22□□□□□ -0.29
MKS1-209ENST00000580127 TXN2Q99757 166 aa13.22□□□□□ -0.29
MKS1-209ENST00000580127 CHRDL1Q9BU40 450 aa13.22□□□□□ -0.29
MKS1-209ENST00000580127 RHPN1-AS1Q9BWJ2 59 aa13.22□□□□□ -0.29
MKS1-209ENST00000580127 TRAV14DV4A0A0A6YYC5 116 aa13.21□□□□□ -0.29
MKS1-209ENST00000580127 IGHV3-21A0A0B4J1V1 117 aa13.21□□□□□ -0.29
MKS1-209ENST00000580127 ZNF207O43670 478 aaKnown RBP13.21□□□□□ -0.29
MKS1-209ENST00000580127 PGLYRP1O75594 196 aaPredicted RBP13.21□□□□□ -0.29
MKS1-209ENST00000580127 EIF4EP06730 217 aaKnown RBP13.21□□□□□ -0.29
MKS1-209ENST00000580127 MFAP4P55083 255 aa13.21□□□□□ -0.29
MKS1-209ENST00000580127 RPP25LQ8N5L8 163 aaKnown RBP13.21□□□□□ -0.29
MKS1-209ENST00000580127 YTHDF1Q9BYJ9 559 aaKnown RBP13.21□□□□□ -0.29
MKS1-209ENST00000580127 EHFQ9NZC4 300 aa13.21□□□□□ -0.29
MKS1-209ENST00000580127 IGHV3OR16-8A0A075B7F1 116 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 IGHV7-4-1A0A0J9YVY3 117 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 FCER2P06734 321 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 CTSGP08311 255 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 LPCAT3Q6P1A2 487 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 CROCCP3Q8IVE0 287 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 APRG1Q8IVJ8 170 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 CENPSQ8N2Z9 138 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 OR5H6Q8NGV6 325 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 OR1P1Q8NH06 330 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 OR11H2Q8NH07 326 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 GINS3Q9BRX5 216 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 Q9H521 79 aa13.2□□□□□ -0.3
MKS1-209ENST00000580127 PLECQ15149 4684 aaKnown RBP13.2□□□□□ -0.3
MKS1-209ENST00000580127 CHEK1O14757 476 aa13.19□□□□□ -0.3
MKS1-209ENST00000580127 RLN1P04808 185 aa13.19□□□□□ -0.3
MKS1-209ENST00000580127 TAS2R46P59540 309 aa13.19□□□□□ -0.3
MKS1-209ENST00000580127 OR6F1Q8NGZ6 308 aa13.19□□□□□ -0.3
MKS1-209ENST00000580127 FCAMRQ8WWV6 532 aa13.19□□□□□ -0.3
MKS1-209ENST00000580127 SLC25A46Q96AG3 418 aa13.19□□□□□ -0.3
MKS1-209ENST00000580127 RNF2Q99496 336 aa13.19□□□□□ -0.3
MKS1-209ENST00000580127 ZNF2Q9BSG1 426 aaPredicted RBP13.19□□□□□ -0.3
MKS1-209ENST00000580127 FBXL17Q9UF56 701 aa13.19□□□□□ -0.3
MKS1-209ENST00000580127 LOC100506127A0A0U1RQW1 187 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 K7EIM0 57 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 DNASE2O00115 360 aaPredicted RBP13.18□□□□□ -0.3
MKS1-209ENST00000580127 XRCC3O43542 346 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 FCGR2BP31994 310 aaPredicted RBP13.18□□□□□ -0.3
MKS1-209ENST00000580127 G6PCP35575 357 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 TFPI2P48307 235 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 MFAP2P55001 183 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 OR5H2Q8NGV7 314 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 OR4A16Q8NH70 328 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 C2CD4CQ8TF44 421 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 MOB3AQ96BX8 217 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 SLC25A38Q96DW6 304 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 MISP3Q96FF7 219 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 NSG2Q9Y328 171 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 ALMS1Q8TCU4 4167 aa13.18□□□□□ -0.3
MKS1-209ENST00000580127 GPR31O00270 319 aa13.17□□□□□ -0.3
MKS1-209ENST00000580127 GNG7O60262 68 aa13.17□□□□□ -0.3
MKS1-209ENST00000580127 RFX2P48378 723 aa13.17□□□□□ -0.3
MKS1-209ENST00000580127 DUSP18Q8NEJ0 188 aa13.17□□□□□ -0.3
MKS1-209ENST00000580127 OR10C1Q96KK4 312 aa13.17□□□□□ -0.3
MKS1-209ENST00000580127 C11orf68Q9H3H3 251 aaKnown RBP13.17□□□□□ -0.3
MKS1-209ENST00000580127 FAM212BQ9NTI7 297 aaPredicted RBP13.17□□□□□ -0.3
MKS1-209ENST00000580127 IGKV3-7A0A075B6H7 116 aa13.16□□□□□ -0.3
MKS1-209ENST00000580127 MEIS3P1A6NDR6 274 aa13.16□□□□□ -0.3
MKS1-209ENST00000580127 DFFBO76075 338 aa13.16□□□□□ -0.3
MKS1-209ENST00000580127 CLEC2LP0C7M8 214 aa13.16□□□□□ -0.3
MKS1-209ENST00000580127 ERHP84090 104 aaKnown RBP13.16□□□□□ -0.3
MKS1-209ENST00000580127 TMEM187Q14656 261 aa13.16□□□□□ -0.3
MKS1-209ENST00000580127 H2BFWTQ7Z2G1 175 aa13.16□□□□□ -0.3
MKS1-209ENST00000580127 NXF2Q9GZY0 626 aaKnown RBP13.16□□□□□ -0.3
MKS1-209ENST00000580127 TMEM14BQ9NUH8 114 aa13.16□□□□□ -0.3
MKS1-209ENST00000580127 C11orf94C9JXX5 98 aa13.15□□□□□ -0.3
MKS1-209ENST00000580127 F8W735 103 aaPredicted RBP13.15□□□□□ -0.3
MKS1-209ENST00000580127 DEDDO75618 318 aa13.15□□□□□ -0.3
MKS1-209ENST00000580127 PMP2P02689 132 aa13.15□□□□□ -0.3
MKS1-209ENST00000580127 NPBWR1P48145 328 aa13.15□□□□□ -0.3
MKS1-209ENST00000580127 NANOS2P60321 138 aaKnown RBP13.15□□□□□ -0.3
MKS1-209ENST00000580127 TSPAN5P62079 268 aa13.15□□□□□ -0.3
MKS1-209ENST00000580127 RPL11P62913 178 aaKnown RBP13.15□□□□□ -0.3
MKS1-209ENST00000580127 GBGT1Q8N5D6 347 aa13.15□□□□□ -0.3
MKS1-209ENST00000580127 TMEM231Q9H6L2 316 aa13.15□□□□□ -0.3
MKS1-209ENST00000580127 IGHV3-49A0A0A0MS15 119 aa13.14□□□□□ -0.31
MKS1-209ENST00000580127 C15orf61A6NNL5 157 aa13.14□□□□□ -0.31
MKS1-209ENST00000580127 CA1P00915 261 aaPredicted RBP13.14□□□□□ -0.31
MKS1-209ENST00000580127 PRSS3P35030 304 aa13.14□□□□□ -0.31
MKS1-209ENST00000580127 TMEM69Q5SWH9 247 aa13.14□□□□□ -0.31
MKS1-209ENST00000580127 TCF24Q7RTU0 167 aa13.14□□□□□ -0.31
MKS1-209ENST00000580127 I3L2K1 104 aa13.13□□□□□ -0.31
MKS1-209ENST00000580127 ST8SIA3O43173 380 aa13.13□□□□□ -0.31
MKS1-209ENST00000580127 MT-CO2P00403 227 aa13.13□□□□□ -0.31
MKS1-209ENST00000580127 SNCAP37840 140 aa13.13□□□□□ -0.31
MKS1-209ENST00000580127 TMEM41BQ5BJD5 291 aa13.13□□□□□ -0.31
MKS1-209ENST00000580127 UBE2NLQ5JXB2 153 aa13.13□□□□□ -0.31
MKS1-209ENST00000580127 FAM90A2PQ658T7 463 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms