RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 ZNF345Q14585 488 aa1.49□□□□□ -2.17
LINC00557-201ENST00000563184 CDK5R1Q15078 307 aa1.49□□□□□ -2.17
LINC00557-201ENST00000563184 HIST2H3PS2Q5TEC6 136 aa1.49□□□□□ -2.17
LINC00557-201ENST00000563184 LPCAT4Q643R3 524 aa1.49□□□□□ -2.17
LINC00557-201ENST00000563184 Q6ZS49 121 aa1.49□□□□□ -2.17
LINC00557-201ENST00000563184 DERL1Q9BUN8 251 aa1.49□□□□□ -2.17
LINC00557-201ENST00000563184 IRGMA1A4Y4 181 aa1.48□□□□□ -2.17
LINC00557-201ENST00000563184 SDCBPO00560 298 aaPredicted RBP1.48□□□□□ -2.17
LINC00557-201ENST00000563184 IGKV1-5P01602 117 aa1.48□□□□□ -2.17
LINC00557-201ENST00000563184 RPS4Y1P22090 263 aaKnown RBP1.48□□□□□ -2.17
LINC00557-201ENST00000563184 HIST3H3Q16695 136 aa1.48□□□□□ -2.17
LINC00557-201ENST00000563184 NDUFA5Q16718 116 aa1.48□□□□□ -2.17
LINC00557-201ENST00000563184 AADACL3Q5VUY0 350 aa1.48□□□□□ -2.17
LINC00557-201ENST00000563184 DCXRQ7Z4W1 244 aa1.48□□□□□ -2.17
LINC00557-201ENST00000563184 TP73-AS1Q9UF72 201 aa1.48□□□□□ -2.17
LINC00557-201ENST00000563184 SOX21Q9Y651 276 aaPredicted RBP1.48□□□□□ -2.17
LINC00557-201ENST00000563184 ALPK2Q86TB3 2170 aa1.47□□□□□ -2.17
LINC00557-201ENST00000563184 NIPSNAP2O75323 286 aa1.47□□□□□ -2.17
LINC00557-201ENST00000563184 PMP2P02689 132 aa1.47□□□□□ -2.17
LINC00557-201ENST00000563184 EIF2B2P49770 351 aaKnown RBP1.47□□□□□ -2.17
LINC00557-201ENST00000563184 MRPL30Q8TCC3 161 aaKnown RBP1.47□□□□□ -2.17
LINC00557-201ENST00000563184 SNAPC4Q5SXM2 1469 aa1.47□□□□□ -2.17
LINC00557-201ENST00000563184 DOCK5Q9H7D0 1870 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 IGKV2-40A0A087WW87 121 aaPredicted RBP1.46□□□□□ -2.18
LINC00557-201ENST00000563184 IGKV2D-40P01614 121 aaPredicted RBP1.46□□□□□ -2.18
LINC00557-201ENST00000563184 TNNC2P02585 160 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 METTL15P1P0C7V9 234 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 UBBP0CG47 229 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 SPCS3P61009 180 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 RPS19BP1Q86WX3 136 aaKnown RBP1.46□□□□□ -2.18
LINC00557-201ENST00000563184 IQCF2Q8IXL9 164 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 RASSF5Q8WWW0 418 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 C11orf40Q8WZ69 217 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 ARL5BQ96KC2 179 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 PPP1R2P1Q96PQ5 205 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 MED9Q9NWA0 146 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 POLEQ07864 2286 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 ADCY9O60503 1353 aa1.46□□□□□ -2.18
LINC00557-201ENST00000563184 TECTAO75443 2155 aa1.45□□□□□ -2.18
LINC00557-201ENST00000563184 IGKV3-7A0A075B6H7 116 aa1.45□□□□□ -2.18
LINC00557-201ENST00000563184 AHSA1O95433 338 aa1.45□□□□□ -2.18
LINC00557-201ENST00000563184 RUNX1Q01196 453 aa1.45□□□□□ -2.18
LINC00557-201ENST00000563184 SURF2Q15527 256 aaPredicted RBP1.45□□□□□ -2.18
LINC00557-201ENST00000563184 IMPG1Q17R60 797 aa1.45□□□□□ -2.18
LINC00557-201ENST00000563184 YIPF3Q9GZM5 350 aa1.45□□□□□ -2.18
LINC00557-201ENST00000563184 KIF13BQ9NQT8 1826 aa1.45□□□□□ -2.18
LINC00557-201ENST00000563184 TMEM212A6NML5 194 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 HLA-DRB1P01911 266 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 SHBGP04278 402 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 HIST1H1TP22492 207 aaPredicted RBP1.44□□□□□ -2.18
LINC00557-201ENST00000563184 HIST1H2BOP23527 126 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 HIST1H2BBP33778 126 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 HIST1H2BDP58876 126 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 HIST1H2BCP62807 126 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 ZNF846Q147U1 533 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 HIST2H2BEQ16778 126 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.44□□□□□ -2.18
LINC00557-201ENST00000563184 CCDC122Q5T0U0 273 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 LRRC25Q8N386 305 aaPredicted RBP1.44□□□□□ -2.18
LINC00557-201ENST00000563184 HIST1H2BHQ93079 126 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 IMP4Q96G21 291 aaKnown RBP1.44□□□□□ -2.18
LINC00557-201ENST00000563184 HIST1H2BNQ99877 126 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 HIST1H2BMQ99879 126 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 PKIGQ9Y2B9 76 aa1.44□□□□□ -2.18
LINC00557-201ENST00000563184 TTC21AQ8NDW8 1320 aa1.43□□□□□ -2.18
LINC00557-201ENST00000563184 WRNQ14191 1432 aaPredicted RBP eCLIP1.43□□□□□ -2.18
LINC00557-201ENST00000563184 FAAHO00519 579 aa1.43□□□□□ -2.18
LINC00557-201ENST00000563184 SNRPD2P62316 118 aaKnown RBP1.43□□□□□ -2.18
LINC00557-201ENST00000563184 HBA1P69905 142 aa1.43□□□□□ -2.18
LINC00557-201ENST00000563184 C10orf55Q5SWW7 151 aa1.43□□□□□ -2.18
LINC00557-201ENST00000563184 PTRHD1Q6GMV3 140 aaKnown RBP1.43□□□□□ -2.18
LINC00557-201ENST00000563184 RPL22L1Q6P5R6 122 aaKnown RBP1.43□□□□□ -2.18
LINC00557-201ENST00000563184 LCN15Q6UWW0 184 aa1.43□□□□□ -2.18
LINC00557-201ENST00000563184 PFN4Q8NHR9 129 aa1.43□□□□□ -2.18
LINC00557-201ENST00000563184 TMEM106AQ96A25 262 aa1.43□□□□□ -2.18
LINC00557-201ENST00000563184 OR52E6Q96RD3 313 aa1.43□□□□□ -2.18
LINC00557-201ENST00000563184 FBXL12Q9NXK8 326 aa1.43□□□□□ -2.18
LINC00557-201ENST00000563184 M0R036 132 aa1.42□□□□□ -2.18
LINC00557-201ENST00000563184 IFNA16P05015 189 aa1.42□□□□□ -2.18
LINC00557-201ENST00000563184 RNASE3P12724 160 aaKnown RBP1.42□□□□□ -2.18
LINC00557-201ENST00000563184 G6PCP35575 357 aa1.42□□□□□ -2.18
LINC00557-201ENST00000563184 STX5Q13190 355 aa1.42□□□□□ -2.18
LINC00557-201ENST00000563184 KCNJ8Q15842 424 aa1.42□□□□□ -2.18
LINC00557-201ENST00000563184 ACOT6Q3I5F7 207 aaPredicted RBP1.42□□□□□ -2.18
LINC00557-201ENST00000563184 C20orf196Q8IYI0 205 aa1.42□□□□□ -2.18
LINC00557-201ENST00000563184 OR13C4Q8NGS5 318 aa1.42□□□□□ -2.18
LINC00557-201ENST00000563184 REG4Q9BYZ8 158 aa1.42□□□□□ -2.18
LINC00557-201ENST00000563184 C11orf68Q9H3H3 251 aaKnown RBP1.42□□□□□ -2.18
LINC00557-201ENST00000563184 MTUS2Q5JR59 1369 aa1.42□□□□□ -2.18
LINC00557-201ENST00000563184 PSMD12O00232 456 aaPredicted RBP1.41□□□□□ -2.18
LINC00557-201ENST00000563184 HCRTO43612 131 aa1.41□□□□□ -2.18
LINC00557-201ENST00000563184 CHP2O43745 196 aa1.41□□□□□ -2.18
LINC00557-201ENST00000563184 CD79AP11912 226 aa1.41□□□□□ -2.18
LINC00557-201ENST00000563184 RPL5P46777 297 aaKnown RBP1.41□□□□□ -2.18
LINC00557-201ENST00000563184 SULT1A1P50225 295 aa1.41□□□□□ -2.18
LINC00557-201ENST00000563184 RPS20P60866 119 aaKnown RBP1.41□□□□□ -2.18
LINC00557-201ENST00000563184 UBE2IP63279 158 aaKnown RBP1.41□□□□□ -2.18
LINC00557-201ENST00000563184 NIPSNAP1Q9BPW8 284 aa1.41□□□□□ -2.18
LINC00557-201ENST00000563184 PARVGQ9HBI0 331 aa1.41□□□□□ -2.18
LINC00557-201ENST00000563184 MRPL27Q9P0M9 148 aaKnown RBP1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms