RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 BSCL2Q96G97 398 aaPredicted RBP12.77□□□□□ -0.37
LRRC28-210ENST00000558879 ZNF414Q96IQ9 312 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 TMEM56Q96MV1 263 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 HINT2Q9BX68 163 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 PALMDQ9NP74 551 aa12.77□□□□□ -0.37
LRRC28-210ENST00000558879 P0C879 139 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 PRCDQ00LT1 54 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 GUCA2BQ16661 112 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 SLC25A24Q6NUK1 477 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 SPSB3Q6PJ21 355 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 GPR141Q7Z602 305 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 DEFB125Q8N687 156 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 OR1L6Q8NGR2 347 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 OR1P1Q8NH06 330 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 SCARB1Q8WTV0 552 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 SRD5A3Q9H8P0 318 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 C21orf62Q9NYP8 219 aa12.76□□□□□ -0.37
LRRC28-210ENST00000558879 MRPL27Q9P0M9 148 aaKnown RBP12.76□□□□□ -0.37
LRRC28-210ENST00000558879 IGHV3-35A0A0C4DH35 117 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 RBMY1BA6NDE4 496 aaKnown RBP12.75□□□□□ -0.37
LRRC28-210ENST00000558879 RBMY1EA6NEQ0 496 aaKnown RBP12.75□□□□□ -0.37
LRRC28-210ENST00000558879 OR2T8A6NH00 312 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 RBMY1DP0C7P1 496 aaKnown RBP12.75□□□□□ -0.37
LRRC28-210ENST00000558879 ADMP35318 185 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 SPCS2Q15005 226 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 H2BFWTQ7Z2G1 175 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 OR2C3Q8N628 320 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 OR4D10Q8NGI6 311 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 C15orf40Q8WUR7 153 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 ISOC1Q96CN7 298 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 CHRDL1Q9BU40 450 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 HIPK2Q9H2X6 1198 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 UFC1Q9Y3C8 167 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 SELENOKQ9Y6D0 94 aa12.75□□□□□ -0.37
LRRC28-210ENST00000558879 TRAV25A0A0B4J276 109 aa12.74□□□□□ -0.37
LRRC28-210ENST00000558879 OR11H12B2RN74 326 aa12.74□□□□□ -0.37
LRRC28-210ENST00000558879 GABARAPH6UMI1 98 aa12.74□□□□□ -0.37
LRRC28-210ENST00000558879 NDUFA4O00483 81 aa12.74□□□□□ -0.37
LRRC28-210ENST00000558879 IGKV1-5P01602 117 aa12.74□□□□□ -0.37
LRRC28-210ENST00000558879 IFNA6P05013 189 aa12.74□□□□□ -0.37
LRRC28-210ENST00000558879 PI3P19957 117 aa12.74□□□□□ -0.37
LRRC28-210ENST00000558879 PPP5CP53041 499 aa12.74□□□□□ -0.37
LRRC28-210ENST00000558879 PIGPP57054 158 aa12.74□□□□□ -0.37
LRRC28-210ENST00000558879 TMEM229BQ8NBD8 167 aa12.74□□□□□ -0.37
LRRC28-210ENST00000558879 TP53RKQ96S44 253 aa12.74□□□□□ -0.37
LRRC28-210ENST00000558879 DAZ1Q9NQZ3 744 aaKnown RBP12.74□□□□□ -0.37
LRRC28-210ENST00000558879 DYNC2H1Q8NCM8 4307 aaKnown RBP12.74□□□□□ -0.37
LRRC28-210ENST00000558879 IGHV3-21A0A0B4J1V1 117 aa12.73□□□□□ -0.37
LRRC28-210ENST00000558879 I3L2K1 104 aa12.73□□□□□ -0.37
LRRC28-210ENST00000558879 SCAF4O95104 1147 aaKnown RBP12.73□□□□□ -0.37
LRRC28-210ENST00000558879 PGAM2P15259 253 aa12.73□□□□□ -0.37
LRRC28-210ENST00000558879 FCGR2BP31994 310 aaPredicted RBP12.73□□□□□ -0.37
LRRC28-210ENST00000558879 TAS2R19P59542 299 aa12.73□□□□□ -0.37
LRRC28-210ENST00000558879 MRPS10P82664 201 aaKnown RBP12.73□□□□□ -0.37
LRRC28-210ENST00000558879 SSBP1Q04837 148 aaKnown RBP12.73□□□□□ -0.37
LRRC28-210ENST00000558879 SLC16A13Q7RTY0 426 aa12.73□□□□□ -0.37
LRRC28-210ENST00000558879 OR4A16Q8NH70 328 aa12.73□□□□□ -0.37
LRRC28-210ENST00000558879 RETNQ9HD89 108 aa12.73□□□□□ -0.37
LRRC28-210ENST00000558879 CTDSP2O14595 271 aa12.72□□□□□ -0.37
LRRC28-210ENST00000558879 LYL1P12980 280 aa12.72□□□□□ -0.37
LRRC28-210ENST00000558879 HSPE1P61604 102 aaKnown RBP12.72□□□□□ -0.37
LRRC28-210ENST00000558879 IZUMO4Q1ZYL8 232 aa12.72□□□□□ -0.37
LRRC28-210ENST00000558879 SMIM4Q8WVI0 70 aa12.72□□□□□ -0.37
LRRC28-210ENST00000558879 BCL7BQ9BQE9 202 aa12.72□□□□□ -0.37
LRRC28-210ENST00000558879 C5orf66Q9H5L9 145 aa12.72□□□□□ -0.37
LRRC28-210ENST00000558879 CCDC59Q9P031 241 aaKnown RBP12.72□□□□□ -0.37
LRRC28-210ENST00000558879 C3orf85A0A1B0GTC6 90 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 INS-IGF2F8WCM5 200 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 RGS5O15539 181 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 RAB3DO95716 219 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 CTSGP08311 255 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 UCP1P25874 307 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 STEAP1BQ6NZ63 245 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 OR52B4Q8NGK2 314 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 OR13C8Q8NGS7 320 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 TERB2Q8NHR7 220 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 DYNC2LI1Q8TCX1 351 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 RAB2BQ8WUD1 216 aa12.71□□□□□ -0.37
LRRC28-210ENST00000558879 SPAG8Q99932 426 aaPredicted RBP12.71□□□□□ -0.37
LRRC28-210ENST00000558879 GAR1Q9NY12 217 aaKnown RBP12.71□□□□□ -0.37
LRRC28-210ENST00000558879 K7EMT4 169 aa12.7□□□□□ -0.38
LRRC28-210ENST00000558879 TSPAN4O14817 238 aa12.7□□□□□ -0.38
LRRC28-210ENST00000558879 CTDSPLO15194 276 aa12.7□□□□□ -0.38
LRRC28-210ENST00000558879 CTSDP07339 412 aaPredicted RBP12.7□□□□□ -0.38
LRRC28-210ENST00000558879 AKR1C2P52895 323 aa12.7□□□□□ -0.38
LRRC28-210ENST00000558879 ANKRD55Q3KP44 614 aa12.7□□□□□ -0.38
LRRC28-210ENST00000558879 Q56UQ5 140 aa12.7□□□□□ -0.38
LRRC28-210ENST00000558879 CLVS1Q8IUQ0 354 aaPredicted RBP12.7□□□□□ -0.38
LRRC28-210ENST00000558879 CCDC71LQ8N9Z2 235 aa12.7□□□□□ -0.38
LRRC28-210ENST00000558879 UBAC2Q8NBM4 344 aa12.7□□□□□ -0.38
LRRC28-210ENST00000558879 ZFAND1Q8TCF1 268 aa12.7□□□□□ -0.38
LRRC28-210ENST00000558879 FAM110AQ9BQ89 295 aa12.7□□□□□ -0.38
LRRC28-210ENST00000558879 A0A0B4J293 547 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 A0A0G2JRQ6 117 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 C15orf62A8K5M9 175 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 MT-CO2P00403 227 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 TMBIM6P55061 237 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 SCGB2B2Q4G0G5 96 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 PVRIGQ6DKI7 326 aa12.69□□□□□ -0.38
LRRC28-210ENST00000558879 FAAP20Q6NZ36 180 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms