RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 CTSGP08311 255 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 CBX5P45973 191 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 TFPI2P48307 235 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 HERV-K104P61576 105 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 ZNF124Q15973 351 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 TMEM17Q86X19 198 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 OR5AP2Q8NGF4 316 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 CNBD2Q96M20 576 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 VCX3BQ9H321 246 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 FKBP11Q9NYL4 201 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 SSR3Q9UNL2 185 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 OR51B2Q9Y5P1 312 aa17.76■□□□□ 0.43
FOXA1-204ENST00000554607 F2RP25116 425 aa17.75■□□□□ 0.43
FOXA1-204ENST00000554607 GNRHRP30968 328 aa17.75■□□□□ 0.43
FOXA1-204ENST00000554607 HSPA13P48723 471 aa17.75■□□□□ 0.43
FOXA1-204ENST00000554607 PAFAH1B2P68402 229 aa17.75■□□□□ 0.43
FOXA1-204ENST00000554607 OR10C1Q96KK4 312 aa17.75■□□□□ 0.43
FOXA1-204ENST00000554607 DNAH6Q9C0G6 4158 aa17.75■□□□□ 0.43
FOXA1-204ENST00000554607 YIF1AO95070 293 aa17.74■□□□□ 0.43
FOXA1-204ENST00000554607 CD5P06127 495 aa17.74■□□□□ 0.43
FOXA1-204ENST00000554607 UBE2UQ5VVX9 321 aa17.74■□□□□ 0.43
FOXA1-204ENST00000554607 DIABLOQ9NR28 239 aa17.74■□□□□ 0.43
FOXA1-204ENST00000554607 PRNDQ9UKY0 176 aa17.74■□□□□ 0.43
FOXA1-204ENST00000554607 TRAV14DV4A0A0A6YYC5 116 aa17.73■□□□□ 0.43
FOXA1-204ENST00000554607 KRASP01116 189 aa17.73■□□□□ 0.43
FOXA1-204ENST00000554607 PRR20EP86478 221 aa17.73■□□□□ 0.43
FOXA1-204ENST00000554607 PRR20CP86479 221 aa17.73■□□□□ 0.43
FOXA1-204ENST00000554607 PRR20DP86480 221 aa17.73■□□□□ 0.43
FOXA1-204ENST00000554607 PRR20BP86481 221 aa17.73■□□□□ 0.43
FOXA1-204ENST00000554607 PRR20AP86496 221 aa17.73■□□□□ 0.43
FOXA1-204ENST00000554607 TSPAN14Q8NG11 270 aa17.73■□□□□ 0.43
FOXA1-204ENST00000554607 OR1P1Q8NH06 330 aa17.73■□□□□ 0.43
FOXA1-204ENST00000554607 DGCR14Q96DF8 476 aaKnown RBP17.73■□□□□ 0.43
FOXA1-204ENST00000554607 TXN2Q99757 166 aa17.73■□□□□ 0.43
FOXA1-204ENST00000554607 AUNIPQ9H7T9 357 aa17.73■□□□□ 0.43
FOXA1-204ENST00000554607 IGKV3-7A0A075B6H7 116 aa17.72■□□□□ 0.43
FOXA1-204ENST00000554607 PGLYRP1O75594 196 aaPredicted RBP17.72■□□□□ 0.43
FOXA1-204ENST00000554607 FCER2P06734 321 aa17.72■□□□□ 0.43
FOXA1-204ENST00000554607 PSMB9P28065 219 aa17.72■□□□□ 0.43
FOXA1-204ENST00000554607 LPAR6P43657 344 aa17.72■□□□□ 0.43
FOXA1-204ENST00000554607 MFAP4P55083 255 aa17.72■□□□□ 0.43
FOXA1-204ENST00000554607 GABARAPL2P60520 117 aa17.72■□□□□ 0.43
FOXA1-204ENST00000554607 TMEM187Q14656 261 aa17.72■□□□□ 0.43
FOXA1-204ENST00000554607 FAM90A2PQ658T7 463 aa17.72■□□□□ 0.43
FOXA1-204ENST00000554607 OR5H6Q8NGV6 325 aa17.72■□□□□ 0.43
FOXA1-204ENST00000554607 SLC25A38Q96DW6 304 aa17.72■□□□□ 0.43
FOXA1-204ENST00000554607 NSG2Q9Y328 171 aa17.72■□□□□ 0.43
FOXA1-204ENST00000554607 KIAA1109Q2LD37 5005 aa17.71■□□□□ 0.43
FOXA1-204ENST00000554607 C11orf94C9JXX5 98 aa17.71■□□□□ 0.43
FOXA1-204ENST00000554607 CA1P00915 261 aaPredicted RBP17.71■□□□□ 0.43
FOXA1-204ENST00000554607 RLN1P04808 185 aa17.71■□□□□ 0.43
FOXA1-204ENST00000554607 SDC2P34741 201 aa17.71■□□□□ 0.43
FOXA1-204ENST00000554607 DHRS11Q6UWP2 260 aa17.71■□□□□ 0.43
FOXA1-204ENST00000554607 GBGT1Q8N5D6 347 aa17.71■□□□□ 0.43
FOXA1-204ENST00000554607 FCAMRQ8WWV6 532 aa17.71■□□□□ 0.43
FOXA1-204ENST00000554607 SLC25A46Q96AG3 418 aa17.71■□□□□ 0.43
FOXA1-204ENST00000554607 TSC22D3Q99576 134 aa17.71■□□□□ 0.43
FOXA1-204ENST00000554607 IGHV3-49A0A0A0MS15 119 aa17.7■□□□□ 0.42
FOXA1-204ENST00000554607 ANKRD65E5RJM6 399 aa17.7■□□□□ 0.42
FOXA1-204ENST00000554607 EIF4EP06730 217 aaKnown RBP17.7■□□□□ 0.42
FOXA1-204ENST00000554607 G6PCP35575 357 aa17.7■□□□□ 0.42
FOXA1-204ENST00000554607 IDNKQ5T6J7 187 aa17.7■□□□□ 0.42
FOXA1-204ENST00000554607 CMTM1Q8IZ96 169 aa17.7■□□□□ 0.42
FOXA1-204ENST00000554607 FCGR1BQ92637 280 aa17.7■□□□□ 0.42
FOXA1-204ENST00000554607 NXF2Q9GZY0 626 aaKnown RBP17.7■□□□□ 0.42
FOXA1-204ENST00000554607 EHFQ9NZC4 300 aa17.7■□□□□ 0.42
FOXA1-204ENST00000554607 IGLL5B9A064 214 aa17.69■□□□□ 0.42
FOXA1-204ENST00000554607 DFFBO76075 338 aa17.69■□□□□ 0.42
FOXA1-204ENST00000554607 MXD1Q05195 221 aa17.69■□□□□ 0.42
FOXA1-204ENST00000554607 IZUMO2Q6UXV1 221 aa17.69■□□□□ 0.42
FOXA1-204ENST00000554607 MOB3AQ96BX8 217 aa17.69■□□□□ 0.42
FOXA1-204ENST00000554607 MISP3Q96FF7 219 aa17.69■□□□□ 0.42
FOXA1-204ENST00000554607 ZNF414Q96IQ9 312 aa17.69■□□□□ 0.42
FOXA1-204ENST00000554607 GINS3Q9BRX5 216 aa17.69■□□□□ 0.42
FOXA1-204ENST00000554607 IFT46Q9NQC8 304 aa17.69■□□□□ 0.42
FOXA1-204ENST00000554607 APLNQ9ULZ1 77 aa17.69■□□□□ 0.42
FOXA1-204ENST00000554607 C15orf61A6NNL5 157 aa17.68■□□□□ 0.42
FOXA1-204ENST00000554607 I3L2K1 104 aa17.68■□□□□ 0.42
FOXA1-204ENST00000554607 DEFB4AO15263 64 aa17.68■□□□□ 0.42
FOXA1-204ENST00000554607 TCF24Q7RTU0 167 aa17.68■□□□□ 0.42
FOXA1-204ENST00000554607 SPARTQ8N0X7 666 aa17.68■□□□□ 0.42
FOXA1-204ENST00000554607 ZNF2Q9BSG1 426 aaPredicted RBP17.68■□□□□ 0.42
FOXA1-204ENST00000554607 HRH4Q9H3N8 390 aa17.68■□□□□ 0.42
FOXA1-204ENST00000554607 TMEM14BQ9NUH8 114 aa17.68■□□□□ 0.42
FOXA1-204ENST00000554607 DNASE2O00115 360 aaPredicted RBP17.67■□□□□ 0.42
FOXA1-204ENST00000554607 IGHV3OR16-13A0A075B7E8 117 aa17.66■□□□□ 0.42
FOXA1-204ENST00000554607 IGHV3-74A0A0B4J1X5 117 aa17.66■□□□□ 0.42
FOXA1-204ENST00000554607 MEIS3P1A6NDR6 274 aa17.66■□□□□ 0.42
FOXA1-204ENST00000554607 GNG7O60262 68 aa17.66■□□□□ 0.42
FOXA1-204ENST00000554607 CLEC2LP0C7M8 214 aa17.66■□□□□ 0.42
FOXA1-204ENST00000554607 TRAV2A0A0B4J234 112 aa17.65■□□□□ 0.42
FOXA1-204ENST00000554607 GPR31O00270 319 aa17.65■□□□□ 0.42
FOXA1-204ENST00000554607 ST8SIA3O43173 380 aa17.65■□□□□ 0.42
FOXA1-204ENST00000554607 TMEM127O75204 238 aa17.65■□□□□ 0.42
FOXA1-204ENST00000554607 MT-CO2P00403 227 aa17.65■□□□□ 0.42
FOXA1-204ENST00000554607 RFX2P48378 723 aa17.65■□□□□ 0.42
FOXA1-204ENST00000554607 DEFB131AP59861 70 aa17.65■□□□□ 0.42
FOXA1-204ENST00000554607 ZNF114Q8NC26 417 aa17.65■□□□□ 0.42
FOXA1-204ENST00000554607 DUSP18Q8NEJ0 188 aa17.65■□□□□ 0.42
FOXA1-204ENST00000554607 MS4A6AQ9H2W1 248 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms