RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 DGCR14Q96DF8 476 aaKnown RBP8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 BSCL2Q96G97 398 aaPredicted RBP8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 THYN1Q9P016 225 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 SMPXQ9UHP9 88 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 TP53TG1Q9Y2A0 90 aa8.51□□□□□ -1.05
PRPF40B-212ENST00000551111 IGKV3-7A0A075B6H7 116 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 NAT1P18440 290 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 CBX5P45973 191 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 TFPI2P48307 235 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 APOC4P55056 127 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 TAS2R20P59543 309 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 IZUMO4Q1ZYL8 232 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 PHLDA2Q53GA4 152 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 Q56UQ5 140 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 LILRB2Q8N423 598 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 CD300LFQ8TDQ1 290 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 YTHDF1Q9BYJ9 559 aaKnown RBP8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 MAP6D1Q9H9H5 199 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 IFT46Q9NQC8 304 aa8.5□□□□□ -1.05
PRPF40B-212ENST00000551111 DNAH6Q9C0G6 4158 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 NUPR2A6NF83 97 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 I3L2K1 104 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 K7EMT4 169 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 CHEK1O14757 476 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 APOHP02749 345 aaPredicted RBP8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 FGF2P09038 288 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 ERVK-16P61578 105 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 LSM3P62310 102 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 LAMTOR1Q6IAA8 161 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 SPSB3Q6PJ21 355 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 GBGT1Q8N5D6 347 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 STPG3Q8N7X2 389 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 LSM10Q969L4 123 aaKnown RBP8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 TMEM14BQ9NUH8 114 aa8.49□□□□□ -1.05
PRPF40B-212ENST00000551111 KIR2DL5BA0A0G2JN68 375 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 KIR2DL5BA0A0G2JPC4 375 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 IGHV7-4-1A0A0J9YVY3 117 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 C15orf62A8K5M9 175 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 GPR31O00270 319 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 UBE2CO00762 179 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 EIF4EP06730 217 aaKnown RBP8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 HLA-DMAP28067 261 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 HRH1P35367 487 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 SPINK9Q5DT21 86 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 UBE2NLQ5JXB2 153 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 FAM90A2PQ658T7 463 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 THOC7Q6I9Y2 204 aaKnown RBP8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 KIR2DL5AQ8N109 375 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 SAMD12Q8N8I0 201 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 OR5H2Q8NGV7 314 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 KIR2DL5BQ8NHK3 375 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 PHLDA1Q8WV24 401 aaPredicted RBP8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 SLC25A46Q96AG3 418 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 MISP3Q96FF7 219 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 GALNT14Q96FL9 552 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 S100A16Q96FQ6 103 aaKnown RBP8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 SEC22AQ96IW7 307 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 RHPN1-AS1Q9BWJ2 59 aa8.48□□□□□ -1.05
PRPF40B-212ENST00000551111 IGHV3-66A0A0C4DH42 116 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 OR4C46A6NHA9 309 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 C15orf61A6NNL5 157 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 DEFB4AO15263 64 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 SNAPC5O75971 98 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 YIF1AO95070 293 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 NANOS2P60321 138 aaKnown RBP8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 TMEM69Q5SWH9 247 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 LCE2DQ5TA82 110 aaPredicted RBP8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 HSD17B13Q7Z5P4 300 aaPredicted RBP8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 FAM24BQ8N5W8 94 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 TMEM116Q8NCL8 245 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 YIPF6Q96EC8 236 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 OR10C1Q96KK4 312 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 PRNDQ9UKY0 176 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 HERC2O95714 4834 aa8.47□□□□□ -1.05
PRPF40B-212ENST00000551111 NUPL2O15504 423 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 CYB5BO43169 146 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 MT-CO2P00403 227 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 PRSS3P35030 304 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 PRR20EP86478 221 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 PRR20CP86479 221 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 PRR20DP86480 221 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 PRR20BP86481 221 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 PRR20AP86496 221 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 TBC1D26Q86UD7 250 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 CADM3Q8N126 398 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 OR6F1Q8NGZ6 308 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 OR1P1Q8NH06 330 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 GPX8Q8TED1 209 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 ST8SIA2Q92186 375 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 MRGPRFQ96AM1 343 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 PINX1Q96BK5 328 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 NXF2Q9GZY0 626 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 CSTL1Q9H114 145 aa8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 MRPL36Q9P0J6 103 aaKnown RBP8.46□□□□□ -1.06
PRPF40B-212ENST00000551111 PI3P19957 117 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 MFAP4P55083 255 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 TAS2R46P59540 309 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 MLANAQ16655 118 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 LEMD1Q68G75 181 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 TOMM20LQ6UXN7 152 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms