RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 IFITM3Q01628 133 aa14.57□□□□□ -0.08
VPS33A-205ENST00000541169 WT1-ASQ06250 92 aa14.57□□□□□ -0.08
VPS33A-205ENST00000541169 ANKRD55Q3KP44 614 aa14.57□□□□□ -0.08
VPS33A-205ENST00000541169 PLET1Q6UQ28 207 aa14.57□□□□□ -0.08
VPS33A-205ENST00000541169 C8orf86Q6ZUL3 223 aa14.57□□□□□ -0.08
VPS33A-205ENST00000541169 LYZL2Q7Z4W2 148 aa14.57□□□□□ -0.08
VPS33A-205ENST00000541169 OR10W1Q8NGF6 305 aa14.57□□□□□ -0.08
VPS33A-205ENST00000541169 OR1P1Q8NH06 330 aa14.57□□□□□ -0.08
VPS33A-205ENST00000541169 DPF1Q92782 380 aa14.57□□□□□ -0.08
VPS33A-205ENST00000541169 ATP6V0BQ99437 205 aa14.57□□□□□ -0.08
VPS33A-205ENST00000541169 F11RQ9Y624 299 aaKnown RBP14.57□□□□□ -0.08
VPS33A-205ENST00000541169 IGLV11-55A0A075B6I3 123 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 DBX1A6NMT0 343 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 FAM90A26D6RGX4 464 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 LY86O95711 162 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 HSPB1P04792 205 aaKnown RBP14.56□□□□□ -0.08
VPS33A-205ENST00000541169 ZNF616Q08AN1 781 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 ZNF343Q6P1L6 599 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 OR2C3Q8N628 320 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 WFDC9Q8NEX5 89 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 OR1N2Q8NGR9 330 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 MITD1Q8WV92 249 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 P2RX4Q99571 388 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 RANGRFQ9HD47 186 aaPredicted RBP14.56□□□□□ -0.08
VPS33A-205ENST00000541169 FBXL7Q9UJT9 491 aa14.56□□□□□ -0.08
VPS33A-205ENST00000541169 TRAV6A0A075B6T7 132 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 TRBV7-1A0A0A6YYK4 115 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 A0A0G2JRQ6 117 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 CORTO00230 105 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 PRAF2O60831 178 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 ZP3P21754 424 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 ATP5IP56385 69 aaPredicted RBP14.55□□□□□ -0.08
VPS33A-205ENST00000541169 FHL3Q13643 280 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 IZUMO4Q1ZYL8 232 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 C15orf32Q32M92 178 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 Q6ZRM9 215 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 NOXA1Q86UR1 476 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 OR11H1Q8NG94 326 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 VN1R17PQ8TDU5 208 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 RAX2Q96IS3 184 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 FANCD2OSQ96PS1 177 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 MCRIP2Q9BUT9 160 aaKnown RBP14.55□□□□□ -0.08
VPS33A-205ENST00000541169 GPR61Q9BZJ8 451 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 HIPK2Q9H2X6 1198 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 GNB4Q9HAV0 340 aa14.55□□□□□ -0.08
VPS33A-205ENST00000541169 GPN1Q9HCN4 374 aaPredicted RBP14.55□□□□□ -0.08
VPS33A-205ENST00000541169 IL5P05113 134 aa14.54□□□□□ -0.08
VPS33A-205ENST00000541169 HOXA1P49639 335 aaPredicted RBP14.54□□□□□ -0.08
VPS33A-205ENST00000541169 OR1S1Q8NH92 325 aa14.54□□□□□ -0.08
VPS33A-205ENST00000541169 ZNF431Q8TF32 576 aaPredicted RBP14.54□□□□□ -0.08
VPS33A-205ENST00000541169 EEF1AKMT3Q96AZ1 226 aa14.54□□□□□ -0.08
VPS33A-205ENST00000541169 GAR1Q9NY12 217 aaKnown RBP14.54□□□□□ -0.08
VPS33A-205ENST00000541169 HSPB7Q9UBY9 170 aa14.54□□□□□ -0.08
VPS33A-205ENST00000541169 LINC01619G3V211 115 aa14.53□□□□□ -0.08
VPS33A-205ENST00000541169 MED6O75586 246 aa14.53□□□□□ -0.08
VPS33A-205ENST00000541169 OR2J3O76001 311 aa14.53□□□□□ -0.08
VPS33A-205ENST00000541169 REG1AP05451 166 aa14.53□□□□□ -0.08
VPS33A-205ENST00000541169 CD33P20138 364 aa14.53□□□□□ -0.08
VPS33A-205ENST00000541169 HTR2BP41595 481 aa14.53□□□□□ -0.08
VPS33A-205ENST00000541169 TNFRSF9Q07011 255 aa14.53□□□□□ -0.08
VPS33A-205ENST00000541169 NRARPQ7Z6K4 114 aa14.53□□□□□ -0.08
VPS33A-205ENST00000541169 RCC1LQ96I51 464 aaKnown RBP14.53□□□□□ -0.08
VPS33A-205ENST00000541169 PRR13Q9NZ81 148 aa14.53□□□□□ -0.08
VPS33A-205ENST00000541169 PEF1Q9UBV8 284 aaKnown RBP14.53□□□□□ -0.08
VPS33A-205ENST00000541169 PITX3O75364 302 aa14.52□□□□□ -0.09
VPS33A-205ENST00000541169 PTTG1O95997 202 aa14.52□□□□□ -0.09
VPS33A-205ENST00000541169 PRH1P02810 166 aa14.52□□□□□ -0.09
VPS33A-205ENST00000541169 EXOSC2Q13868 293 aaKnown RBP14.52□□□□□ -0.09
VPS33A-205ENST00000541169 HIST2H2BDQ6DRA6 164 aa14.52□□□□□ -0.09
VPS33A-205ENST00000541169 SLC25A24Q6NUK1 477 aa14.52□□□□□ -0.09
VPS33A-205ENST00000541169 ETV3LQ6ZN32 361 aa14.52□□□□□ -0.09
VPS33A-205ENST00000541169 C18orf65Q6ZTR6 163 aa14.52□□□□□ -0.09
VPS33A-205ENST00000541169 LINC00482Q8N8I6 264 aa14.52□□□□□ -0.09
VPS33A-205ENST00000541169 MARVELD1Q9BSK0 173 aa14.52□□□□□ -0.09
VPS33A-205ENST00000541169 ANK2Q01484 3957 aa14.52□□□□□ -0.09
VPS33A-205ENST00000541169 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.51□□□□□ -0.09
VPS33A-205ENST00000541169 CEBPZOSA8MTT3 80 aa14.51□□□□□ -0.09
VPS33A-205ENST00000541169 IGHV3-11P01762 117 aa14.51□□□□□ -0.09
VPS33A-205ENST00000541169 HOXB5P09067 269 aa14.51□□□□□ -0.09
VPS33A-205ENST00000541169 TATDN3Q17R31 274 aa14.51□□□□□ -0.09
VPS33A-205ENST00000541169 GGNBP1Q5YKI7 109 aa14.51□□□□□ -0.09
VPS33A-205ENST00000541169 CIB3Q96Q77 187 aaPredicted RBP14.51□□□□□ -0.09
VPS33A-205ENST00000541169 OR5B12Q96R08 314 aa14.51□□□□□ -0.09
VPS33A-205ENST00000541169 HEYLQ9NQ87 328 aaPredicted RBP14.51□□□□□ -0.09
VPS33A-205ENST00000541169 SNRPGP15A8MWD9 76 aa14.5□□□□□ -0.09
VPS33A-205ENST00000541169 U3KQ87 197 aa14.5□□□□□ -0.09
VPS33A-205ENST00000541169 INMT-MINDY4F8WBC2 141 aa14.49□□□□□ -0.09
VPS33A-205ENST00000541169 NDUFB8O95169 186 aa14.49□□□□□ -0.09
VPS33A-205ENST00000541169 RPP30P78346 268 aaKnown RBP14.49□□□□□ -0.09
VPS33A-205ENST00000541169 DEFB136Q30KP8 78 aa14.49□□□□□ -0.09
VPS33A-205ENST00000541169 BSXQ3C1V8 233 aa14.49□□□□□ -0.09
VPS33A-205ENST00000541169 PVRIGQ6DKI7 326 aa14.49□□□□□ -0.09
VPS33A-205ENST00000541169 C12orf45Q8N5I9 185 aaPredicted RBP14.49□□□□□ -0.09
VPS33A-205ENST00000541169 TXN2Q99757 166 aa14.49□□□□□ -0.09
VPS33A-205ENST00000541169 ZMAT5Q9UDW3 170 aaKnown RBP14.49□□□□□ -0.09
VPS33A-205ENST00000541169 DCTN2Q13561 401 aaKnown RBP14.48□□□□□ -0.09
VPS33A-205ENST00000541169 C2orf83Q53S99 150 aa14.48□□□□□ -0.09
VPS33A-205ENST00000541169 RNASEH2CQ8TDP1 164 aaKnown RBP14.48□□□□□ -0.09
VPS33A-205ENST00000541169 DTD1Q8TEA8 209 aa14.48□□□□□ -0.09
VPS33A-205ENST00000541169 WNK1Q9H4A3 2382 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms