RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 CADM3Q8N126 398 aa14.56□□□□□ -0.08
LPCAT3-210ENST00000540090 HINT2Q9BX68 163 aa14.56□□□□□ -0.08
LPCAT3-210ENST00000540090 RHBDL2Q9NX52 303 aa14.56□□□□□ -0.08
LPCAT3-210ENST00000540090 DAPK2Q9UIK4 370 aa14.56□□□□□ -0.08
LPCAT3-210ENST00000540090 DNAH11Q96DT5 4516 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 IGKV3-7A0A075B6H7 116 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 IGHV3-49A0A0A0MS15 119 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 MARCH11A6NNE9 402 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 C11orf94C9JXX5 98 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 NUPL2O15504 423 aaKnown RBP14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 CA1P00915 261 aaPredicted RBP14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 GNRHRP30968 328 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 FGF9P31371 208 aaPredicted RBP14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 ERVK-16P61578 105 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 LINC00336Q6ZUF6 198 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 TPRA1Q86W33 373 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 LGALS14Q8TCE9 139 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 NRG4Q8WWG1 115 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 DGCR14Q96DF8 476 aaKnown RBP14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 CMTM3Q96MX0 182 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 HRH4Q9H3N8 390 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 OR51B2Q9Y5P1 312 aa14.55□□□□□ -0.08
LPCAT3-210ENST00000540090 TRAV18A0A075B6X5 111 aa14.54□□□□□ -0.08
LPCAT3-210ENST00000540090 TRAV14DV4A0A0A6YYC5 116 aa14.54□□□□□ -0.08
LPCAT3-210ENST00000540090 YIF1AO95070 293 aa14.54□□□□□ -0.08
LPCAT3-210ENST00000540090 PAFAH1B2P68402 229 aa14.54□□□□□ -0.08
LPCAT3-210ENST00000540090 GBGT1Q8N5D6 347 aa14.54□□□□□ -0.08
LPCAT3-210ENST00000540090 TXNL4BQ9NX01 149 aaKnown RBP14.54□□□□□ -0.08
LPCAT3-210ENST00000540090 NSG2Q9Y328 171 aa14.54□□□□□ -0.08
LPCAT3-210ENST00000540090 C15orf61A6NNL5 157 aa14.53□□□□□ -0.08
LPCAT3-210ENST00000540090 F2RP25116 425 aa14.53□□□□□ -0.08
LPCAT3-210ENST00000540090 SFXN4Q6P4A7 337 aa14.53□□□□□ -0.08
LPCAT3-210ENST00000540090 TMEM17Q86X19 198 aa14.53□□□□□ -0.08
LPCAT3-210ENST00000540090 Q8NAQ8 132 aa14.53□□□□□ -0.08
LPCAT3-210ENST00000540090 OR1P1Q8NH06 330 aa14.53□□□□□ -0.08
LPCAT3-210ENST00000540090 TMEM56Q96MV1 263 aa14.53□□□□□ -0.08
LPCAT3-210ENST00000540090 TXN2Q99757 166 aa14.53□□□□□ -0.08
LPCAT3-210ENST00000540090 RRP15Q9Y3B9 282 aaKnown RBP14.53□□□□□ -0.08
LPCAT3-210ENST00000540090 A0A1B0GVY2 172 aa14.52□□□□□ -0.09
LPCAT3-210ENST00000540090 SNAPC5O75971 98 aa14.52□□□□□ -0.09
LPCAT3-210ENST00000540090 KRASP01116 189 aa14.52□□□□□ -0.09
LPCAT3-210ENST00000540090 CD5P06127 495 aa14.52□□□□□ -0.09
LPCAT3-210ENST00000540090 TCF24Q7RTU0 167 aa14.52□□□□□ -0.09
LPCAT3-210ENST00000540090 OR5AP2Q8NGF4 316 aa14.52□□□□□ -0.09
LPCAT3-210ENST00000540090 BORCS5Q969J3 196 aa14.52□□□□□ -0.09
LPCAT3-210ENST00000540090 NXF2Q9GZY0 626 aaKnown RBP14.52□□□□□ -0.09
LPCAT3-210ENST00000540090 IGHV3OR16-13A0A075B7E8 117 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 IGHV3-74A0A0B4J1X5 117 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 I3L2K1 104 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 XRCC3O43542 346 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 PGLYRP1O75594 196 aaPredicted RBP14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 DFFBO76075 338 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 FCER2P06734 321 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 LPAR6P43657 344 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 MFAP4P55083 255 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 OR5H6Q8NGV6 325 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 FCAMRQ8WWV6 532 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 SLC25A46Q96AG3 418 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 SLC25A38Q96DW6 304 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 FKBP11Q9NYL4 201 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 PRNDQ9UKY0 176 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 BLOC1S6Q9UL45 172 aa14.51□□□□□ -0.09
LPCAT3-210ENST00000540090 A0A0A6YYH2 397 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 A6NJ64 397 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 MED14OSP0DP75 135 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 G6PCP35575 357 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 SCAND1P57086 179 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 DEFB131AP59861 70 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 LEMD1Q68G75 181 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 DHRS11Q6UWP2 260 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 LILRB2Q8N423 598 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 MS4A6AQ9H2W1 248 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 VSIRQ9H7M9 311 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 AUNIPQ9H7T9 357 aa14.5□□□□□ -0.09
LPCAT3-210ENST00000540090 DBX1A6NMT0 343 aa14.49□□□□□ -0.09
LPCAT3-210ENST00000540090 RLN1P04808 185 aa14.49□□□□□ -0.09
LPCAT3-210ENST00000540090 GIG44P09565 113 aaPredicted RBP14.49□□□□□ -0.09
LPCAT3-210ENST00000540090 RBMY1A1P0DJD3 496 aaKnown RBP14.49□□□□□ -0.09
LPCAT3-210ENST00000540090 RBMY1CP0DJD4 496 aa14.49□□□□□ -0.09
LPCAT3-210ENST00000540090 HLA-DMBP28068 263 aa14.49□□□□□ -0.09
LPCAT3-210ENST00000540090 HERV-K104P61576 105 aa14.49□□□□□ -0.09
LPCAT3-210ENST00000540090 RBMY1FQ15415 496 aaKnown RBP14.49□□□□□ -0.09
LPCAT3-210ENST00000540090 TMEM14BQ9NUH8 114 aa14.49□□□□□ -0.09
LPCAT3-210ENST00000540090 TRAV2A0A0B4J234 112 aa14.48□□□□□ -0.09
LPCAT3-210ENST00000540090 DNASE2O00115 360 aaPredicted RBP14.48□□□□□ -0.09
LPCAT3-210ENST00000540090 CBX5P45973 191 aa14.48□□□□□ -0.09
LPCAT3-210ENST00000540090 UBE2UQ5VVX9 321 aa14.48□□□□□ -0.09
LPCAT3-210ENST00000540090 TOMM20LQ6UXN7 152 aa14.48□□□□□ -0.09
LPCAT3-210ENST00000540090 ST8SIA2Q92186 375 aa14.48□□□□□ -0.09
LPCAT3-210ENST00000540090 MISP3Q96FF7 219 aa14.48□□□□□ -0.09
LPCAT3-210ENST00000540090 GINS3Q9BRX5 216 aa14.48□□□□□ -0.09
LPCAT3-210ENST00000540090 TRAV10A0A0B4J240 114 aa14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 IGHV4-28A0A0C4DH34 117 aa14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 ST8SIA3O43173 380 aa14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 MT-CO2P00403 227 aa14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 APOHP02749 345 aaPredicted RBP14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 SDC2P34741 201 aa14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 FAM24BQ8N5W8 94 aa14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 DUSP18Q8NEJ0 188 aa14.47□□□□□ -0.09
LPCAT3-210ENST00000540090 MOB3AQ96BX8 217 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 472.3 ms