RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 RNF2Q99496 336 aa13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 DIABLOQ9NR28 239 aa13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 OR51B2Q9Y5P1 312 aa13.58□□□□□ -0.24
SSSCA1-206ENST00000531405 HERC2O95714 4834 aa13.57□□□□□ -0.24
SSSCA1-206ENST00000531405 K7EMT4 169 aa13.57□□□□□ -0.24
SSSCA1-206ENST00000531405 PGLYRP1O75594 196 aaPredicted RBP13.57□□□□□ -0.24
SSSCA1-206ENST00000531405 F2RP25116 425 aa13.57□□□□□ -0.24
SSSCA1-206ENST00000531405 LPAR6P43657 344 aa13.57□□□□□ -0.24
SSSCA1-206ENST00000531405 TFPI2P48307 235 aa13.57□□□□□ -0.24
SSSCA1-206ENST00000531405 RFX2P48378 723 aa13.57□□□□□ -0.24
SSSCA1-206ENST00000531405 TMEM217Q8N7C4 229 aa13.57□□□□□ -0.24
SSSCA1-206ENST00000531405 IFT46Q9NQC8 304 aa13.57□□□□□ -0.24
SSSCA1-206ENST00000531405 SMPXQ9UHP9 88 aa13.57□□□□□ -0.24
SSSCA1-206ENST00000531405 AGRNO00468 2067 aa13.56□□□□□ -0.24
SSSCA1-206ENST00000531405 IGKV3-7A0A075B6H7 116 aa13.56□□□□□ -0.24
SSSCA1-206ENST00000531405 DBX1A6NMT0 343 aa13.56□□□□□ -0.24
SSSCA1-206ENST00000531405 C15orf62A8K5M9 175 aa13.56□□□□□ -0.24
SSSCA1-206ENST00000531405 CTSGP08311 255 aa13.56□□□□□ -0.24
SSSCA1-206ENST00000531405 CBX5P45973 191 aa13.56□□□□□ -0.24
SSSCA1-206ENST00000531405 ZNF2Q9BSG1 426 aaPredicted RBP13.56□□□□□ -0.24
SSSCA1-206ENST00000531405 CHEK1O14757 476 aa13.55□□□□□ -0.24
SSSCA1-206ENST00000531405 PMP2P02689 132 aa13.55□□□□□ -0.24
SSSCA1-206ENST00000531405 MOB3AQ96BX8 217 aa13.55□□□□□ -0.24
SSSCA1-206ENST00000531405 DGCR14Q96DF8 476 aaKnown RBP13.55□□□□□ -0.24
SSSCA1-206ENST00000531405 ATP6V0BQ99437 205 aa13.55□□□□□ -0.24
SSSCA1-206ENST00000531405 RHPN1-AS1Q9BWJ2 59 aa13.55□□□□□ -0.24
SSSCA1-206ENST00000531405 FXYD6Q9H0Q3 95 aa13.55□□□□□ -0.24
SSSCA1-206ENST00000531405 IGHV3OR16-13A0A075B7E8 117 aa13.54□□□□□ -0.24
SSSCA1-206ENST00000531405 IGHV3-74A0A0B4J1X5 117 aa13.54□□□□□ -0.24
SSSCA1-206ENST00000531405 IGHV7-4-1A0A0J9YVY3 117 aa13.54□□□□□ -0.24
SSSCA1-206ENST00000531405 SNAPC5O75971 98 aa13.54□□□□□ -0.24
SSSCA1-206ENST00000531405 NANOS2P60321 138 aaKnown RBP13.54□□□□□ -0.24
SSSCA1-206ENST00000531405 DHRS11Q6UWP2 260 aa13.54□□□□□ -0.24
SSSCA1-206ENST00000531405 TMEM116Q8NCL8 245 aa13.54□□□□□ -0.24
SSSCA1-206ENST00000531405 TSPAN14Q8NG11 270 aa13.54□□□□□ -0.24
SSSCA1-206ENST00000531405 BORCS5Q969J3 196 aa13.54□□□□□ -0.24
SSSCA1-206ENST00000531405 CSTL1Q9H114 145 aa13.54□□□□□ -0.24
SSSCA1-206ENST00000531405 XRCC3O43542 346 aa13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 YIF1AO95070 293 aa13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 IGHV3-48P01763 117 aa13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 TGFBR1P36897 503 aa13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 LGALS9CQ6DKI2 356 aa13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 GBGT1Q8N5D6 347 aa13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 SLC25A46Q96AG3 418 aa13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 MISP3Q96FF7 219 aa13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 TMEM56Q96MV1 263 aa13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 RARRES2Q99969 163 aa13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 C6orf62Q9GZU0 229 aaPredicted RBP13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 PRNDQ9UKY0 176 aa13.53□□□□□ -0.24
SSSCA1-206ENST00000531405 MPTX1A8MV57 137 aa13.52□□□□□ -0.25
SSSCA1-206ENST00000531405 NUPL2O15504 423 aaKnown RBP13.52□□□□□ -0.25
SSSCA1-206ENST00000531405 RELQ04864 619 aaPredicted RBP13.52□□□□□ -0.25
SSSCA1-206ENST00000531405 OR5H2Q8NGV7 314 aa13.52□□□□□ -0.25
SSSCA1-206ENST00000531405 OR1P1Q8NH06 330 aa13.52□□□□□ -0.25
SSSCA1-206ENST00000531405 TMEM14BQ9NUH8 114 aa13.52□□□□□ -0.25
SSSCA1-206ENST00000531405 FBXL17Q9UF56 701 aa13.52□□□□□ -0.25
SSSCA1-206ENST00000531405 ANAPC10Q9UM13 185 aa13.52□□□□□ -0.25
SSSCA1-206ENST00000531405 C15orf61A6NNL5 157 aa13.51□□□□□ -0.25
SSSCA1-206ENST00000531405 I3L2K1 104 aa13.51□□□□□ -0.25
SSSCA1-206ENST00000531405 GPR31O00270 319 aa13.51□□□□□ -0.25
SSSCA1-206ENST00000531405 NEDD8Q15843 81 aa13.51□□□□□ -0.25
SSSCA1-206ENST00000531405 PHLDA2Q53GA4 152 aa13.51□□□□□ -0.25
SSSCA1-206ENST00000531405 CMTM1Q8IZ96 169 aa13.51□□□□□ -0.25
SSSCA1-206ENST00000531405 OR11H2Q8NH07 326 aa13.51□□□□□ -0.25
SSSCA1-206ENST00000531405 S100A16Q96FQ6 103 aaKnown RBP13.51□□□□□ -0.25
SSSCA1-206ENST00000531405 OR10C1Q96KK4 312 aa13.51□□□□□ -0.25
SSSCA1-206ENST00000531405 DEFB4AO15263 64 aa13.5□□□□□ -0.25
SSSCA1-206ENST00000531405 MFAP4P55083 255 aa13.5□□□□□ -0.25
SSSCA1-206ENST00000531405 TAS2R20P59543 309 aa13.5□□□□□ -0.25
SSSCA1-206ENST00000531405 TMEM69Q5SWH9 247 aa13.5□□□□□ -0.25
SSSCA1-206ENST00000531405 FAM90A2PQ658T7 463 aa13.5□□□□□ -0.25
SSSCA1-206ENST00000531405 CADM3Q8N126 398 aa13.5□□□□□ -0.25
SSSCA1-206ENST00000531405 C11orf45Q8TAV5 145 aa13.5□□□□□ -0.25
SSSCA1-206ENST00000531405 GATAD1Q8WUU5 269 aa13.5□□□□□ -0.25
SSSCA1-206ENST00000531405 NXF2Q9GZY0 626 aaKnown RBP13.5□□□□□ -0.25
SSSCA1-206ENST00000531405 FKBP11Q9NYL4 201 aa13.5□□□□□ -0.25
SSSCA1-206ENST00000531405 TRAV14DV4A0A0A6YYC5 116 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 MT-CO2P00403 227 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 NAT1P18440 290 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 HRH1P35367 487 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 TAS2R46P59540 309 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 PRR20EP86478 221 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 PRR20CP86479 221 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 PRR20DP86480 221 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 PRR20BP86481 221 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 PRR20AP86496 221 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 RBMS2Q15434 407 aaKnown RBP13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 UBE2NLQ5JXB2 153 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 PINX1Q96BK5 328 aaKnown RBP13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 CMTM3Q96MX0 182 aa13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 YTHDF1Q9BYJ9 559 aaKnown RBP13.49□□□□□ -0.25
SSSCA1-206ENST00000531405 CA1P00915 261 aaPredicted RBP13.48□□□□□ -0.25
SSSCA1-206ENST00000531405 APOHP02749 345 aaPredicted RBP13.48□□□□□ -0.25
SSSCA1-206ENST00000531405 HLA-DMAP28067 261 aa13.48□□□□□ -0.25
SSSCA1-206ENST00000531405 CMC4P56277 68 aaPredicted RBP13.48□□□□□ -0.25
SSSCA1-206ENST00000531405 TCF24Q7RTU0 167 aa13.48□□□□□ -0.25
SSSCA1-206ENST00000531405 LYSMD2Q8IV50 215 aa13.48□□□□□ -0.25
SSSCA1-206ENST00000531405 SAMD12Q8N8I0 201 aa13.48□□□□□ -0.25
SSSCA1-206ENST00000531405 OR6F1Q8NGZ6 308 aa13.48□□□□□ -0.25
SSSCA1-206ENST00000531405 ST8SIA2Q92186 375 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms