RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	PAFAH1B2	P68402	229 aa		11.49	□□□□□ -0.57
LMNA-223	ENST00000515459	FAM90A2P	Q658T7	463 aa		11.49	□□□□□ -0.57
LMNA-223	ENST00000515459	GBGT1	Q8N5D6	347 aa		11.49	□□□□□ -0.57
LMNA-223	ENST00000515459	ZNF414	Q96IQ9	312 aa		11.49	□□□□□ -0.57
LMNA-223	ENST00000515459	OR10C1	Q96KK4	312 aa		11.49	□□□□□ -0.57
LMNA-223	ENST00000515459	DAPK2	Q9UIK4	370 aa		11.49	□□□□□ -0.57
LMNA-223	ENST00000515459	DNAH6	Q9C0G6	4158 aa		11.49	□□□□□ -0.57
LMNA-223	ENST00000515459	KIAA1109	Q2LD37	5005 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	TRAV14DV4	A0A0A6YYC5	116 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	C15orf61	A6NNL5	157 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	CD5	P06127	495 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	MED14OS	P0DP75	135 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	TMEM17	Q86X19	198 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	HOGA1	Q86XE5	327 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	LGALS14	Q8TCE9	139 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	BORCS5	Q969J3	196 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	DGCR14	Q96DF8	476 aa	Known RBP	11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	TMEM56	Q96MV1	263 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	RHBDL2	Q9NX52	303 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	OR51B2	Q9Y5P1	312 aa		11.48	□□□□□ -0.57
LMNA-223	ENST00000515459	IGHV3OR16-13	A0A075B7E8	117 aa		11.47	□□□□□ -0.57
LMNA-223	ENST00000515459	IGHV3-74	A0A0B4J1X5	117 aa		11.47	□□□□□ -0.57
LMNA-223	ENST00000515459	SNAPC5	O75971	98 aa		11.47	□□□□□ -0.57
LMNA-223	ENST00000515459	TCF24	Q7RTU0	167 aa		11.47	□□□□□ -0.57
LMNA-223	ENST00000515459		Q8NAQ8	132 aa		11.47	□□□□□ -0.57
LMNA-223	ENST00000515459	GIMAP1	Q8WWP7	306 aa		11.47	□□□□□ -0.57
LMNA-223	ENST00000515459	NSG2	Q9Y328	171 aa		11.47	□□□□□ -0.57
LMNA-223	ENST00000515459	TRAV18	A0A075B6X5	111 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459		A0A1B0GVY2	172 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	DFFB	O76075	338 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	KRAS	P01116	189 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	EIF4E	P06730	217 aa	Known RBP	11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	F2R	P25116	425 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	GNRHR	P30968	328 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	MFAP4	P55083	255 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	LEMD1	Q68G75	181 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	TPRA1	Q86W33	373 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	CADM3	Q8N126	398 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	OR1P1	Q8NH06	330 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	SLC25A46	Q96AG3	418 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	TXN2	Q99757	166 aa		11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	TXNL4B	Q9NX01	149 aa	Known RBP	11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	RRP15	Q9Y3B9	282 aa	Known RBP	11.46	□□□□□ -0.57
LMNA-223	ENST00000515459	IGHV4-4	A0A075B6R2	117 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	DNASE2	O00115	360 aa	Predicted RBP	11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	RLN1	P04808	185 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	FCER2	P06734	321 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	HLA-DMB	P28068	263 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	FGF9	P31371	208 aa	Predicted RBP	11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	DEFB131A	P59861	70 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	HERV-K104	P61576	105 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	SFXN4	Q6P4A7	337 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	CENPS	Q8N2Z9	138 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	OR5AP2	Q8NGF4	316 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	GINS3	Q9BRX5	216 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	NXF2	Q9GZY0	626 aa	Known RBP	11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	FKBP11	Q9NYL4	201 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	PRND	Q9UKY0	176 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	BLOC1S6	Q9UL45	172 aa		11.45	□□□□□ -0.58
LMNA-223	ENST00000515459	TRAV10	A0A0B4J240	114 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	IGHV4-28	A0A0C4DH34	117 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459		I3L2K1	104 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	ST8SIA3	O43173	380 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	RBMY1A1	P0DJD3	496 aa	Known RBP	11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	RBMY1C	P0DJD4	496 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	G6PC	P35575	357 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	LPAR6	P43657	344 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	RBMY1F	Q15415	496 aa	Known RBP	11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	STH	Q8IWL8	128 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	TSPAN14	Q8NG11	270 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	NRG4	Q8WWG1	115 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	FCAMR	Q8WWV6	532 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	MISP3	Q96FF7	219 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459	MS4A6A	Q9H2W1	248 aa		11.44	□□□□□ -0.58
LMNA-223	ENST00000515459		A0A0A6YYH2	397 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	TRAV2	A0A0B4J234	112 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459		A6NJ64	397 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	GNG7	O60262	68 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	PGLYRP1	O75594	196 aa	Predicted RBP	11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	MIF	P14174	115 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	RPL11	P62913	178 aa	Known RBP	11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	TMEM41B	Q5BJD5	291 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	PVRIG	Q6DKI7	326 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459		Q6ZTC4	211 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	DUSP18	Q8NEJ0	188 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	ST8SIA2	Q92186	375 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	VSIR	Q9H7M9	311 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	TMEM14B	Q9NUH8	114 aa		11.43	□□□□□ -0.58
LMNA-223	ENST00000515459	PRSS29P	A6NIE9	313 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	MT-CO2	P00403	227 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	CBX5	P45973	191 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	SCAND1	P57086	179 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	LILRB2	Q8N423	598 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	FAM24B	Q8N5W8	94 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	OR5H6	Q8NGV6	325 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	SLC25A38	Q96DW6	304 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	TSC22D3	Q99576	134 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	RNF126	Q9BV68	326 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	AUNIP	Q9H7T9	357 aa		11.42	□□□□□ -0.58
LMNA-223	ENST00000515459	EHF	Q9NZC4	300 aa		11.42	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms