RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 CXorf58Q96LI9 332 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 NEURL2Q9BR09 285 aa9.46□□□□□ -0.9
HSPG2-212ENST00000493940 RTBDNQ9BSG5 229 aaPredicted RBP9.46□□□□□ -0.9
HSPG2-212ENST00000493940 ZNF436Q9C0F3 470 aaPredicted RBP9.46□□□□□ -0.9
HSPG2-212ENST00000493940 FAM212BQ9NTI7 297 aaPredicted RBP9.46□□□□□ -0.9
HSPG2-212ENST00000493940 GAR1Q9NY12 217 aaKnown RBP9.46□□□□□ -0.9
HSPG2-212ENST00000493940 AGRNO00468 2067 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 RGS5O15539 181 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 TGOLN2O43493 480 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 SNAPC5O75971 98 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 PGAM2P15259 253 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 FAM106AQ4KMX7 169 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 STEAP1BQ6NZ63 245 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 BTNL8Q6UX41 500 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 Q6ZRM9 215 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 SGPP2Q8IWX5 399 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 OR2C3Q8N628 320 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 OR13C8Q8NGS7 320 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 OR2K2Q8NGT1 345 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 TERB2Q8NHR7 220 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 LHFPL5Q8TAF8 219 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 DYNLRB2Q8TF09 96 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 CITED4Q96RK1 184 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 SOSTQ9BQB4 213 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 SLIRPQ9GZT3 109 aaKnown RBP9.45□□□□□ -0.9
HSPG2-212ENST00000493940 PRNDQ9UKY0 176 aa9.45□□□□□ -0.9
HSPG2-212ENST00000493940 HYDINQ4G0P3 5121 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 H3BMQ9 156 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 GABARAPH6UMI1 98 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 I3L2K1 104 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 ZNF207O43670 478 aaKnown RBP9.44□□□□□ -0.9
HSPG2-212ENST00000493940 SCAF4O95104 1147 aaKnown RBP9.44□□□□□ -0.9
HSPG2-212ENST00000493940 RAB3DO95716 219 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 IFNA6P05013 189 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 CTSGP08311 255 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 GUCA2BQ16661 112 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 PLET1Q6UQ28 207 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 H2BFWTQ7Z2G1 175 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 ARRDC1Q8N5I2 433 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 OR5B3Q8NH48 314 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 EDA2RQ9HAV5 297 aa9.44□□□□□ -0.9
HSPG2-212ENST00000493940 DNAH1Q9P2D7 4330 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 C3orf85A0A1B0GTC6 90 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 OR11H12B2RN74 326 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 TPPPO94811 219 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 TMBIM6P55061 237 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 HSPE1P61604 102 aaKnown RBP9.43□□□□□ -0.9
HSPG2-212ENST00000493940 PRCDQ00LT1 54 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 MLANAQ16655 118 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 SCGB2B2Q4G0G5 96 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 ZNF57Q68EA5 555 aaPredicted RBP9.43□□□□□ -0.9
HSPG2-212ENST00000493940 THOC7Q6I9Y2 204 aaKnown RBP9.43□□□□□ -0.9
HSPG2-212ENST00000493940 GTSCR1Q86UQ5 136 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 OR4C16Q8NGL9 310 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 OR4A16Q8NH70 328 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 SMIM4Q8WVI0 70 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 DIRAS2Q96HU8 199 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 TUBA4BQ9H853 241 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 C21orf62Q9NYP8 219 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 TECRQ9NZ01 308 aaKnown RBP9.43□□□□□ -0.9
HSPG2-212ENST00000493940 CCDC59Q9P031 241 aaKnown RBP9.43□□□□□ -0.9
HSPG2-212ENST00000493940 CEPT1Q9Y6K0 416 aa9.43□□□□□ -0.9
HSPG2-212ENST00000493940 PLECQ15149 4684 aaKnown RBP9.42□□□□□ -0.9
HSPG2-212ENST00000493940 ST8SIA3O43173 380 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 TNFSF8P32971 234 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 ETV6P41212 452 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 RPL5P46777 297 aaKnown RBP9.42□□□□□ -0.9
HSPG2-212ENST00000493940 TAS2R19P59542 299 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 HSD17B13Q7Z5P4 300 aaPredicted RBP9.42□□□□□ -0.9
HSPG2-212ENST00000493940 UBAC2Q8NBM4 344 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 OR1P1Q8NH06 330 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 MUC7Q8TAX7 377 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 GLYATL2Q8WU03 294 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 RAB2BQ8WUD1 216 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 TMEM190Q8WZ59 177 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 ISOC1Q96CN7 298 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 MISP3Q96FF7 219 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 ZNF486Q96H40 463 aaPredicted RBP9.42□□□□□ -0.9
HSPG2-212ENST00000493940 TMEM56Q96MV1 263 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 FAM110AQ9BQ89 295 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 NXF2Q9GZY0 626 aaKnown RBP9.42□□□□□ -0.9
HSPG2-212ENST00000493940 HIPK2Q9H2X6 1198 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 C5orf66Q9H5L9 145 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 ZMAT4Q9H898 229 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 FKBP11Q9NYL4 201 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 PRR13Q9NZ81 148 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 THYN1Q9P016 225 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 MRPL36Q9P0J6 103 aaKnown RBP9.42□□□□□ -0.9
HSPG2-212ENST00000493940 GPR132Q9UNW8 380 aa9.42□□□□□ -0.9
HSPG2-212ENST00000493940 EPPK1P58107 5090 aaKnown RBP9.42□□□□□ -0.9
HSPG2-212ENST00000493940 ANKRD20A5PA0PJZ0 165 aa9.41□□□□□ -0.9
HSPG2-212ENST00000493940 CTDSPLO15194 276 aa9.41□□□□□ -0.9
HSPG2-212ENST00000493940 CTSDP07339 412 aaPredicted RBP9.41□□□□□ -0.9
HSPG2-212ENST00000493940 TBPP20226 339 aa9.41□□□□□ -0.9
HSPG2-212ENST00000493940 UCP1P25874 307 aa9.41□□□□□ -0.9
HSPG2-212ENST00000493940 IL18Q14116 193 aa9.41□□□□□ -0.9
HSPG2-212ENST00000493940 PVRIGQ6DKI7 326 aa9.41□□□□□ -0.9
HSPG2-212ENST00000493940 TMEM230Q96A57 120 aa9.41□□□□□ -0.9
HSPG2-212ENST00000493940 BSCL2Q96G97 398 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms