RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 XRCC3O43542 346 aa13.38□□□□□ -0.27
UPK3BP1-201ENST00000428678 CTSGP08311 255 aa13.38□□□□□ -0.27
UPK3BP1-201ENST00000428678 RELQ04864 619 aaPredicted RBP13.38□□□□□ -0.27
UPK3BP1-201ENST00000428678 TMEM187Q14656 261 aa13.38□□□□□ -0.27
UPK3BP1-201ENST00000428678 HOGA1Q86XE5 327 aa13.38□□□□□ -0.27
UPK3BP1-201ENST00000428678 APLNQ9ULZ1 77 aa13.38□□□□□ -0.27
UPK3BP1-201ENST00000428678 NSG2Q9Y328 171 aa13.38□□□□□ -0.27
UPK3BP1-201ENST00000428678 OR51B2Q9Y5P1 312 aa13.38□□□□□ -0.27
UPK3BP1-201ENST00000428678 TRAV18A0A075B6X5 111 aa13.37□□□□□ -0.27
UPK3BP1-201ENST00000428678 IGHV3OR16-13A0A075B7E8 117 aa13.37□□□□□ -0.27
UPK3BP1-201ENST00000428678 IGHV3-74A0A0B4J1X5 117 aa13.37□□□□□ -0.27
UPK3BP1-201ENST00000428678 NUPL2O15504 423 aaKnown RBP13.37□□□□□ -0.27
UPK3BP1-201ENST00000428678 RRP15Q9Y3B9 282 aaKnown RBP13.37□□□□□ -0.27
UPK3BP1-201ENST00000428678 C11orf94C9JXX5 98 aa13.36□□□□□ -0.27
UPK3BP1-201ENST00000428678 SNAPC5O75971 98 aa13.36□□□□□ -0.27
UPK3BP1-201ENST00000428678 HERV-K104P61576 105 aa13.36□□□□□ -0.27
UPK3BP1-201ENST00000428678 PAFAH1B2P68402 229 aa13.36□□□□□ -0.27
UPK3BP1-201ENST00000428678 TRAV14DV4A0A0A6YYC5 116 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 KRASP01116 189 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 RLN1P04808 185 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 SFXN4Q6P4A7 337 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 LINC00336Q6ZUF6 198 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 TCF24Q7RTU0 167 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 NRG4Q8WWG1 115 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 MISP3Q96FF7 219 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 ZNF414Q96IQ9 312 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 OR10C1Q96KK4 312 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 TXNL4BQ9NX01 149 aaKnown RBP13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 BLOC1S6Q9UL45 172 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 MUC4Q99102 2169 aa13.35□□□□□ -0.27
UPK3BP1-201ENST00000428678 EIF4EP06730 217 aaKnown RBP13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 GNRHRP30968 328 aa13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 FAM90A2PQ658T7 463 aa13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 LEMD1Q68G75 181 aa13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 TPRA1Q86W33 373 aa13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 TSPAN14Q8NG11 270 aa13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 OR1P1Q8NH06 330 aa13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 GIMAP1Q8WWP7 306 aa13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 BORCS5Q969J3 196 aa13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 SLC25A46Q96AG3 418 aa13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 DGCR14Q96DF8 476 aaKnown RBP13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 TMEM56Q96MV1 263 aa13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 FAT2Q9NYQ8 4349 aa13.34□□□□□ -0.27
UPK3BP1-201ENST00000428678 AGRNO00468 2067 aa13.33□□□□□ -0.27
UPK3BP1-201ENST00000428678 C15orf61A6NNL5 157 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 DNASE2O00115 360 aaPredicted RBP13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 F2RP25116 425 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 FGF9P31371 208 aaPredicted RBP13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 G6PCP35575 357 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 LPAR6P43657 344 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 MFAP4P55083 255 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 DEFB131AP59861 70 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 Q8NAQ8 132 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 OR5AP2Q8NGF4 316 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 SLC25A38Q96DW6 304 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 NXF2Q9GZY0 626 aaKnown RBP13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 HRH4Q9H3N8 390 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 PRNDQ9UKY0 176 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 DNAH2Q9P225 4427 aa13.33□□□□□ -0.28
UPK3BP1-201ENST00000428678 IGHV3-48P01763 117 aa13.32□□□□□ -0.28
UPK3BP1-201ENST00000428678 HLA-DMBP28068 263 aa13.32□□□□□ -0.28
UPK3BP1-201ENST00000428678 OR5H6Q8NGV6 325 aa13.32□□□□□ -0.28
UPK3BP1-201ENST00000428678 FCAMRQ8WWV6 532 aa13.32□□□□□ -0.28
UPK3BP1-201ENST00000428678 CNBD2Q96M20 576 aa13.32□□□□□ -0.28
UPK3BP1-201ENST00000428678 GINS3Q9BRX5 216 aa13.32□□□□□ -0.28
UPK3BP1-201ENST00000428678 MS4A6AQ9H2W1 248 aa13.32□□□□□ -0.28
UPK3BP1-201ENST00000428678 FKBP11Q9NYL4 201 aa13.32□□□□□ -0.28
UPK3BP1-201ENST00000428678 IGHV4-28A0A0C4DH34 117 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 MEIS3P1A6NDR6 274 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 I3L2K1 104 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 ST8SIA3O43173 380 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 GNG7O60262 68 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 PGLYRP1O75594 196 aaPredicted RBP13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 DFFBO76075 338 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 CD5P06127 495 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 PSMB9P28065 219 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 RPL11P62913 178 aaKnown RBP13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 STHQ8IWL8 128 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 CENPSQ8N2Z9 138 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 ST8SIA2Q92186 375 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 TXN2Q99757 166 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 AUNIPQ9H7T9 357 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 EHFQ9NZC4 300 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 DNAH17Q9UFH2 4485 aa13.31□□□□□ -0.28
UPK3BP1-201ENST00000428678 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 TRAV10A0A0B4J240 114 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 IGHV3-66A0A0C4DH42 116 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 DBX1A6NMT0 343 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 ANKRD65E5RJM6 399 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 MT-CO2P00403 227 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 RBMY1A1P0DJD3 496 aaKnown RBP13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 RBMY1CP0DJD4 496 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 SDC2P34741 201 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 CBX5P45973 191 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 MXD1Q05195 221 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 RBMY1FQ15415 496 aaKnown RBP13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 Q6ZTC4 211 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 FAM24BQ8N5W8 94 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 IFT46Q9NQC8 304 aa13.3□□□□□ -0.28
UPK3BP1-201ENST00000428678 TMEM14BQ9NUH8 114 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms