RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 BRI3O95415 125 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 TSPAN15O95858 294 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 IGHV3-11P01762 117 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 SULT1A3P0DMM9 295 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 SULT1A4P0DMN0 295 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 DEFA4P12838 97 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 CDX1P47902 265 aaPredicted RBP7.2□□□□□ -1.26
PDGFC-202ENST00000422544 PRCDQ00LT1 54 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 SMCO1Q147U7 214 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 C2orf68Q2NKX9 166 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 AARDQ4LEZ3 155 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 GGNBP1Q5YKI7 109 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 THOC7Q6I9Y2 204 aaKnown RBP7.2□□□□□ -1.26
PDGFC-202ENST00000422544 C8orf86Q6ZUL3 223 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 HSD17B13Q7Z5P4 300 aaPredicted RBP7.2□□□□□ -1.26
PDGFC-202ENST00000422544 UXS1Q8NBZ7 420 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 KLHL30-AS1Q8NEE0 82 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 ZNF431Q8TF32 576 aaPredicted RBP7.2□□□□□ -1.26
PDGFC-202ENST00000422544 UBE2E2Q96LR5 201 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 SLA2Q9H6Q3 261 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 PLEKHA3Q9HB20 300 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 TMED3Q9Y3Q3 217 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 SACSQ9NZJ4 4579 aa7.2□□□□□ -1.26
PDGFC-202ENST00000422544 DYNC2H1Q8NCM8 4307 aaKnown RBP7.19□□□□□ -1.26
PDGFC-202ENST00000422544 TRBV9A0A0B4J1U6 114 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 MPTX1A8MV57 137 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 OR2J3O76001 311 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 DHFRP00374 187 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 IFNA21P01568 189 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 IL5P05113 134 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 SPCS3P61009 180 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 ERHP84090 104 aaKnown RBP7.19□□□□□ -1.26
PDGFC-202ENST00000422544 RHOGP84095 191 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 DCTN2Q13561 401 aaKnown RBP7.19□□□□□ -1.26
PDGFC-202ENST00000422544 DEFB136Q30KP8 78 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 SLC25A24Q6NUK1 477 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 OR2C3Q8N628 320 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 OR4F17Q8NGA8 305 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 OR52E5Q8NH55 327 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 OR1S1Q8NH92 325 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 C4orf3Q8WVX3 66 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 FANCD2OSQ96PS1 177 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 DUX3Q96PT4 197 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 OR4F4Q96R69 305 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 MARVELD1Q9BSK0 173 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 PALMDQ9NP74 551 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 FBXL7Q9UJT9 491 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 DMRT1Q9Y5R6 373 aa7.19□□□□□ -1.26
PDGFC-202ENST00000422544 IGLV11-55A0A075B6I3 123 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 A0A0G2JLM5 398 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 C13orf42A0A1B0GVH6 325 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 CEBPZOSA8MTT3 80 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 I3L521 148 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 PITX3O75364 302 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 NDUFB8O95169 186 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 PTTG1O95997 202 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 SLC25A6P12236 298 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 HOXA1P49639 335 aaPredicted RBP7.18□□□□□ -1.26
PDGFC-202ENST00000422544 MFAP2P55001 183 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 ATP5G2Q06055 141 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 TNFRSF9Q07011 255 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 PDLIM3Q53GG5 364 aaPredicted RBP7.18□□□□□ -1.26
PDGFC-202ENST00000422544 C11orf87Q6NUJ2 197 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 MRPL41Q8IXM3 137 aaKnown RBP7.18□□□□□ -1.26
PDGFC-202ENST00000422544 C12orf45Q8N5I9 185 aaPredicted RBP7.18□□□□□ -1.26
PDGFC-202ENST00000422544 NECAP1Q8NC96 275 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 RAX2Q96IS3 184 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 USMG5Q96IX5 58 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 P2RX4Q99571 388 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 GPN1Q9HCN4 374 aaPredicted RBP7.18□□□□□ -1.26
PDGFC-202ENST00000422544 ENY2Q9NPA8 101 aa7.18□□□□□ -1.26
PDGFC-202ENST00000422544 F11RQ9Y624 299 aaKnown RBP7.18□□□□□ -1.26
PDGFC-202ENST00000422544 ANKRD34BA5PLL1 514 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 FAM223BA6NKX1 122 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 INS-IGF2F8WCM5 200 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 J3QL48 77 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 CCL24O00175 119 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 CCSO14618 274 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 IGHV3-23P01764 117 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 LGALS1P09382 135 aaKnown RBP7.17□□□□□ -1.26
PDGFC-202ENST00000422544 HIST1H1BP16401 226 aaKnown RBP7.17□□□□□ -1.26
PDGFC-202ENST00000422544 SNCAP37840 140 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 KLK9Q2XQG4 91 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 C15orf32Q32M92 178 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 PRR31Q5SQ13 230 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 ETV3LQ6ZN32 361 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 FAM223AQ8IWN6 122 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 OR11H1Q8NG94 326 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 OR1N2Q8NGR9 330 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 OR1P1Q8NH06 330 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 OR10C1Q96KK4 312 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 RBKSQ9H477 322 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 HEYLQ9NQ87 328 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-202ENST00000422544 HSPB7Q9UBY9 170 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 CACFD1Q9UGQ2 172 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 KLK9Q9UKQ9 250 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 S4R3C0 116 aa7.17□□□□□ -1.26
PDGFC-202ENST00000422544 TET2Q6N021 2002 aaPredicted RBP7.17□□□□□ -1.26
PDGFC-202ENST00000422544 IGHV3-21A0A0B4J1V1 117 aa7.16□□□□□ -1.26
PDGFC-202ENST00000422544 SNRPGP15A8MWD9 76 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms