RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 GPHA2Q96T91 129 aa6.05□□□□□ -1.44
SCFD1-202ENST00000396629 MND1Q9BWT6 205 aa6.05□□□□□ -1.44
SCFD1-202ENST00000396629 MS4A6AQ9H2W1 248 aa6.05□□□□□ -1.44
SCFD1-202ENST00000396629 VSIRQ9H7M9 311 aa6.05□□□□□ -1.44
SCFD1-202ENST00000396629 ELF5Q9UKW6 265 aaPredicted RBP6.05□□□□□ -1.44
SCFD1-202ENST00000396629 F11RQ9Y624 299 aaKnown RBP6.05□□□□□ -1.44
SCFD1-202ENST00000396629 V9GY05 133 aa6.05□□□□□ -1.44
SCFD1-202ENST00000396629 TEX50A0A1B0GTY4 177 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 NUPL2O15504 423 aaKnown RBP6.04□□□□□ -1.44
SCFD1-202ENST00000396629 RAB6AP20340 208 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 C4BPBP20851 252 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 Q56UQ5 140 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 HES5Q5TA89 166 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 CNIH2Q6PI25 160 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 ZNF773Q6PK81 442 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 C10orf67Q8IYJ2 551 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 SPAG16Q8N0X2 631 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 UBAC2Q8NBM4 344 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 S100A14Q9HCY8 104 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 TBC1D24Q9ULP9 559 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 IGHV3OR16-13A0A075B7E8 117 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 IGHV3-74A0A0B4J1X5 117 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 DNASE2O00115 360 aaPredicted RBP6.04□□□□□ -1.44
SCFD1-202ENST00000396629 ARL6IP5O75915 188 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 HPRT1P00492 218 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 NQO2P16083 231 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 NPY1RP25929 384 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 SPHARQ15513 63 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 RNF212Q495C1 297 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 UBE2DNLQ8IWF7 75 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 LILRB2Q8N423 598 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 DUSP18Q8NEJ0 188 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 ST8SIA2Q92186 375 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 TMEM203Q969S6 136 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 FAM210BQ96KR6 192 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 DCSTAMPQ9H295 470 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 SCRT2Q9NQ03 307 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 NDUFA4L2Q9NRX3 87 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 TMEM14BQ9NUH8 114 aa6.04□□□□□ -1.44
SCFD1-202ENST00000396629 TNP2Q05952 138 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 ARL6IP1Q15041 203 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 TRAM1Q15629 374 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 DHRSXQ8N5I4 330 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 BPIFB6Q8NFQ5 453 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 OR1L8Q8NGR8 309 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 TXN2Q99757 166 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 NXF2Q9GZY0 626 aaKnown RBP6.03□□□□□ -1.44
SCFD1-202ENST00000396629 CCL28Q9NRJ3 127 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 TMEM140Q9NV12 185 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 ST8SIA3O43173 380 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 TNFSF12O43508 249 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 YIF1AO95070 293 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 APOHP02749 345 aaPredicted RBP6.03□□□□□ -1.44
SCFD1-202ENST00000396629 MFAP4P55083 255 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 RPS25P62851 125 aaKnown RBP6.03□□□□□ -1.44
SCFD1-202ENST00000396629 CDNFQ49AH0 187 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 ZBTB34Q8NCN2 500 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 UFD1Q92890 307 aa6.03□□□□□ -1.44
SCFD1-202ENST00000396629 LSM10Q969L4 123 aaKnown RBP6.03□□□□□ -1.44
SCFD1-202ENST00000396629 DNAH5Q8TE73 4624 aa6.02□□□□□ -1.44
SCFD1-202ENST00000396629 METTL21EPA6NDL7 271 aa6.02□□□□□ -1.45
SCFD1-202ENST00000396629 K7EQG2 157 aa6.02□□□□□ -1.45
SCFD1-202ENST00000396629 SULT1C2O00338 296 aa6.02□□□□□ -1.45
SCFD1-202ENST00000396629 EIF4EP06730 217 aaKnown RBP6.02□□□□□ -1.45
SCFD1-202ENST00000396629 CALRP27797 417 aaKnown RBP6.02□□□□□ -1.45
SCFD1-202ENST00000396629 HACD4Q5VWC8 232 aa6.02□□□□□ -1.45
SCFD1-202ENST00000396629 C8orf59Q8N0T1 100 aaPredicted RBP6.02□□□□□ -1.45
SCFD1-202ENST00000396629 GRAMD2BQ96HH9 432 aa6.02□□□□□ -1.45
SCFD1-202ENST00000396629 GINS3Q9BRX5 216 aa6.02□□□□□ -1.45
SCFD1-202ENST00000396629 PLEKHA2Q9HB19 425 aa6.02□□□□□ -1.45
SCFD1-202ENST00000396629 CLEC5AQ9NY25 188 aa6.02□□□□□ -1.45
SCFD1-202ENST00000396629 ANXA10Q9UJ72 324 aa6.02□□□□□ -1.45
SCFD1-202ENST00000396629 KNCNA6PVL3 124 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 I3L2K1 104 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 GNAO1P09471 354 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 PSMA1P25786 263 aaKnown RBP6.01□□□□□ -1.45
SCFD1-202ENST00000396629 UBE2UQ5VVX9 321 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 TOMM20LQ6UXN7 152 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 ZNF367Q7RTV3 350 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 CADM3Q8N126 398 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 DMBX1Q8NFW5 382 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 OR1P1Q8NH06 330 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 SECTM1Q8WVN6 248 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 COMMD9Q9P000 198 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 A6NHS1 94 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 FABP5Q01469 135 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 CATR1Q13166 79 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 SLC25A46Q96AG3 418 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 RABAC1Q9UI14 185 aa6.01□□□□□ -1.45
SCFD1-202ENST00000396629 IFITM5A6NNB3 132 aa6□□□□□ -1.45
SCFD1-202ENST00000396629 SSX5O60225 188 aa6□□□□□ -1.45
SCFD1-202ENST00000396629 OR10A3P58181 314 aa6□□□□□ -1.45
SCFD1-202ENST00000396629 FAM3BP58499 235 aaPredicted RBP6□□□□□ -1.45
SCFD1-202ENST00000396629 RPL11P62913 178 aaKnown RBP6□□□□□ -1.45
SCFD1-202ENST00000396629 PACRGLQ8N7B6 248 aa6□□□□□ -1.45
SCFD1-202ENST00000396629 NUDCD2Q8WVJ2 157 aa6□□□□□ -1.45
SCFD1-202ENST00000396629 NEU1Q99519 415 aa6□□□□□ -1.45
SCFD1-202ENST00000396629 HINT2Q9BX68 163 aa6□□□□□ -1.45
SCFD1-202ENST00000396629 ATG5Q9H1Y0 275 aa6□□□□□ -1.45
SCFD1-202ENST00000396629 TMEM231Q9H6L2 316 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms