RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 EXOC3-AS1Q8N2X6 119 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ZFP62Q8NB50 900 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 TMEM161BQ8NDZ6 487 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ATP6V0E2Q8NHE4 81 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 TSLPQ969D9 159 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 THTPAQ9BU02 230 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 RBM12B-AS1Q9P1G2 102 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 HHLA3Q9XRX5 114 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 U3KQK5 164 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR5H1A6NKK0 313 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 CENPXA8MT69 81 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 EFCAB9A8MZ26 197 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 APOC4-APOC2K7ER74 178 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 LGALS9O00182 355 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 PDCD5O14737 125 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 SLC16A7O60669 478 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 SS18L1O75177 396 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 RCBTB2O95199 551 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 APOC2P02655 101 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 TTRP02766 147 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 OPN1SWP03999 348 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 COX6B1P14854 86 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ATP6V0CP27449 155 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 CCKARP32238 428 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 PITPNAQ00169 270 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 FKBP3Q00688 224 aaKnown RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 HIST3H3Q16695 136 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 AVPI1Q5T686 147 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 C9orf66Q5T8R8 295 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 TNFAIP8L2Q6P589 184 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ZNF613Q6PF04 617 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 CMTM1Q8IZ96 169 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 Q8NDZ9 215 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ZNF555Q8NEP9 628 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ATP6V1C2Q8NEY4 427 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 PXT1Q8NFP0 134 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR2G3Q8NGZ4 309 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 CNIH3Q8TBE1 160 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 C18orf32Q8TCD1 76 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 LINC00477Q96M19 166 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 Q96MT0 163 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ZFP3Q96NJ6 502 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ODF3Q96PU9 254 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 GPX7Q96SL4 187 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 URM1Q9BTM9 101 aaKnown RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ULBP3Q9BZM4 244 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 KRCC1Q9NPI7 259 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 RALYQ9UKM9 306 aaKnown RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 SHANK1Q9Y566 2161 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 IGLV3-10A0A075B6K4 115 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 TRAV8-6A0A0B4J262 113 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 TLCD2A6NGC4 264 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 GGT3PA6NGU5 568 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 GABARAPH6UMI1 98 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 CALCAP01258 141 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ATF1P18846 271 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 FOXA3P55318 350 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 RPS24P62847 133 aaKnown RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ZNF616Q08AN1 781 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 TMEM267Q0VDI3 215 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 SMIM21Q3B7S5 101 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ACOT6Q3I5F7 207 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 KRTAP6-3Q3LI67 103 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 LINC01590Q5TEZ4 76 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 FP248Q71RG6 208 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ZNF550Q7Z398 422 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 SLC25A42Q86VD7 318 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ACY3Q96HD9 319 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 EBPLQ9BY08 206 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 WDR61Q9GZS3 305 aaKnown RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 TP73-AS1Q9UF72 201 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 PRO0628Q9UI54 55 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 AMMECR1Q9Y4X0 333 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 OARD1Q9Y530 152 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 IGLV3-9A0A075B6K5 115 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 LOC102724200A0A096LPH7 203 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 IGHV3-72A0A0B4J1Y9 119 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 TRAV38-1A0A0B4J264 116 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 SPAARA0A1B0GVQ0 90 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 A0A1W2PNU3 283 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 IBA57-AS1B1ANH7 110 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 E9PLD3 99 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 C11orf98E9PRG8 122 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 NCR2O95944 276 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 ATP5G1P05496 136 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 RPS3P23396 243 aaKnown RBP eCLIP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 KRTAP10-6P60371 365 aaPredicted RBP1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 RHOBP62745 196 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 SP4Q02446 784 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 LGALS9BQ3B8N2 356 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 LRRC37A5PQ49AS3 106 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 LGALS9CQ6DKI2 356 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 PIM3Q86V86 326 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 DHFR2Q86XF0 187 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 C1orf174Q8IYL3 243 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR11H6Q8NGC7 330 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR51T1Q8NGJ9 327 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR5P3Q8WZ94 311 aa1.23□□□□□ -2.21
SMARCAD1-202ENST00000359052 FAT4Q6V0I7 4981 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 IGHV3OR16-10A0A075B7F0 116 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms