RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FAM222BQ8WU58 562 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 CEACAM18A8MTB9 384 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 RBFOX2O43251 390 aaKnown RBP eCLIP5.17□□□□□ -1.582e-6■■■■■ 30.4
VPS13B-203ENST00000358544 TNXAQ16473 311 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 OR52E5Q8NH55 327 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 A0A1W2PRE2 83 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 H3BTX0 84 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 MGPP08493 103 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 TIMP3P35625 211 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 LRRC10Q5BKY1 277 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 FAM71F2Q6NXP2 309 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 MS4A18H0YCH9 400 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 PSG3Q16557 428 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 MS4A18Q3C1V0 323 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 ALKBH6Q3KRA9 238 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 FAM27BQ5VT28 67 aa5.17□□□□□ -1.58
VPS13B-203ENST00000358544 TMPRSS3P57727 454 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 C6orf15Q6UXA7 325 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 LINC01551Q86U37 167 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 DLX4Q92988 240 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 SCNM1Q9BWG6 230 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 PPIHO43447 177 aaKnown RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 TGFAP01135 160 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 CD33P20138 364 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 TBR1Q16650 682 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 UNQ6494/PRO21346Q6UXR6 183 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 CCL2P13500 99 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 EIF4EBP2Q13542 120 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 ZNF658BQ4V348 819 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 SLC25A47Q6Q0C1 308 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 ATP23Q9Y6H3 246 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 DRAM1Q8N682 238 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 SLC25A40Q8TBP6 338 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 LINC00470Q9BZP3 86 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 UBR3Q6ZT12 1888 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 CISD3P0C7P0 127 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 TPRX1Q8N7U7 411 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 RNASE8Q8TDE3 154 aaKnown RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 UCN2Q96RP3 112 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 RSPO3Q9BXY4 272 aaPredicted RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 IGHV2OR16-5A0A0B4J2B6 119 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 XIRP1Q702N8 1843 aaKnown RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 A0A1B0GUT8 65 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 FBXL7Q9UJT9 491 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 HELZ2Q9BYK8 2649 aaKnown RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 PAPPA-AS1Q5QFB9 102 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 RTN4RL2Q86UN3 420 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 STPG4Q8N801 248 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 OR13C6PQ8NH95 151 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 SERGEFQ9UGK8 458 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 IGLC2P0DOY2 106 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 IGLC3P0DOY3 106 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 ZNF585BQ52M93 769 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 MBNL2Q5VZF2 373 aaKnown RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 HCFC2Q9Y5Z7 792 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 HSPE1P61604 102 aaKnown RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 KLRB1Q12918 225 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 GUSBP1Q15486 140 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 OR2Z1Q8NG97 314 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 ATP6V0BQ99437 205 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 SPTY2D1-AS1A0A0U1RR47 76 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 LILRA1O75019 489 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 PEBP1P30086 187 aaKnown RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 RNPS1Q15287 305 aaKnown RBP5.16□□□□□ -1.58
VPS13B-203ENST00000358544 FAM90A2PQ658T7 463 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 C1QL2Q7Z5L3 287 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 OCC1Q8TAD7 63 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 MS4A5Q9H3V2 200 aa5.16□□□□□ -1.58
VPS13B-203ENST00000358544 GZMHP20718 246 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 ANOS1P23352 680 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 NPVFQ9HCQ7 196 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 MRPL27Q9P0M9 148 aaKnown RBP5.15□□□□□ -1.58
VPS13B-203ENST00000358544 CGAP01215 116 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 MC5RP33032 325 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 PRSS8Q16651 343 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 LINC00696Q6ZRV3 163 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 GCN1Q92616 2671 aaKnown RBP5.15□□□□□ -1.58
VPS13B-203ENST00000358544 BADQ92934 168 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 EAF1Q96JC9 268 aaPredicted RBP5.15□□□□□ -1.58
VPS13B-203ENST00000358544 HARBI1Q96MB7 349 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 SUPT4H1P63272 117 aaKnown RBP5.15□□□□□ -1.58
VPS13B-203ENST00000358544 GAB4Q2WGN9 574 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 GOLT1AQ6ZVE7 132 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 FRMPD3Q5JV73 1810 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 CEACAM8P31997 349 aaPredicted RBP5.15□□□□□ -1.58
VPS13B-203ENST00000358544 TMEM144Q7Z5S9 345 aa5.15□□□□□ -1.58
VPS13B-203ENST00000358544 PSG9Q00887 426 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 Q6AWC8 147 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 MIR17HGQ75NE6 70 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 RNF186Q9NXI6 227 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 KLF13Q9Y2Y9 288 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-203ENST00000358544 LY96Q9Y6Y9 160 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 C9orf118A6NHY6 69 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 RNFT1Q5M7Z0 435 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 UTP20O75691 2785 aaKnown RBP5.15□□□□□ -1.59
VPS13B-203ENST00000358544 IGKV1D-8A0A087WSZ0 117 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 OR2H2O95918 312 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 TMUB1Q9BVT8 246 aa5.15□□□□□ -1.59
VPS13B-203ENST00000358544 FNDC1Q4ZHG4 1894 aaPredicted RBP5.15□□□□□ -1.59
VPS13B-203ENST00000358544 CRXO43186 299 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms