RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 DPTQ07507 201 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 ZP4Q12836 540 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 TPRX1Q8N7U7 411 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 CXXC4Q9H2H0 198 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 CHTOPQ9Y3Y2 248 aaKnown RBP5.3□□□□□ -1.56
VCAN-203ENST00000343200 WDR90Q96KV7 1748 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 A0A0J9YW62 118 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 SOCS1O15524 211 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 TBX6O95947 436 aaPredicted RBP5.3□□□□□ -1.56
VCAN-203ENST00000343200 GNG5P63218 68 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 C1orf61Q13536 156 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 ZNF793Q6ZN11 406 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 FAM89BQ8N5H3 189 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 ARPC1AQ92747 370 aa5.3□□□□□ -1.56
VCAN-203ENST00000343200 IGHV3-15A0A0B4J1V0 119 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 GZMHP20718 246 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 TNFAIP6P98066 277 aaPredicted RBP5.29□□□□□ -1.56
VCAN-203ENST00000343200 ABHD17AQ96GS6 310 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 INSIG2Q9Y5U4 225 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 RAMP3O60896 148 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 APELAP0DMC3 54 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 ATRAIDQ6UW56 229 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 TM4SF19Q96DZ7 209 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 SPINT1O43278 529 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 PRR35P0CG20 571 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 INSM2Q96T92 566 aaPredicted RBP5.29□□□□□ -1.56
VCAN-203ENST00000343200 CLEC1BQ9P126 229 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 K7EP34 96 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 C1orf122Q6ZSJ8 110 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 CCL28Q9NRJ3 127 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 PIEZO2Q9H5I5 2752 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 IL2RAP01589 272 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 IL11P20809 199 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 GCHFRP30047 84 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 FAM159AQ6UWV7 190 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 LINC00696Q6ZRV3 163 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 CHD8Q9HCK8 2581 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 IGHV3-43A0A0B4J1X8 118 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 A0A0U1RQS6 177 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 B5MCH6 92 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 IGHV3-43DP0DP04 118 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 WDR82Q6UXN9 313 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 DEFB108BQ8NET1 73 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 MARS2Q96GW9 593 aaKnown RBP5.29□□□□□ -1.56
VCAN-203ENST00000343200 TNFRSF19Q9NS68 423 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 A0A1W2PNR3 127 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 IQCF3P0C7M6 154 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 PRSS53Q2L4Q9 553 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 SLC25A48Q6ZT89 311 aaKnown RBP5.29□□□□□ -1.56
VCAN-203ENST00000343200 RFESDQ8TAC1 157 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 ZNF488Q96MN9 340 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 GDF15Q99988 308 aa5.29□□□□□ -1.56
VCAN-203ENST00000343200 IGLV3-10A0A075B6K4 115 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 SAA1P0DJI8 122 aaPredicted RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 ICAM4Q14773 271 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 ECSCRQ19T08 205 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 PPP1R27Q86WC6 154 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 OR9G1Q8NH87 305 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 PAPPAQ13219 1627 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 A0A1W2PRE2 83 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 NKX2-2O95096 273 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 C1QAP02745 245 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 PAX1P15863 534 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 RUNX3Q13761 415 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 COL9A2Q14055 689 aaPredicted RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 UTF1Q5T230 341 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 A0A1B0GW64 132 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 RPL36A-HNRNPH2H7BZ11 118 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 SRP19P09132 144 aaKnown RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 MPV17L2Q567V2 206 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 ASPHD2Q6ICH7 369 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 UNQ5815/PRO19632Q6UWF5 114 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 LINC00305Q7Z4B0 112 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 PLPPR2Q96GM1 343 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 ZNF385AQ96PM9 386 aaKnown RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 KLF16Q9BXK1 252 aaPredicted RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 MBNL3Q9NUK0 354 aaKnown RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 KLF13Q9Y2Y9 288 aaPredicted RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 TSSC4Q9Y5U2 329 aaPredicted RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 PGPA6NDG6 321 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 HCFC1R1Q9NWW0 138 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 RPUSD1Q9UJJ7 312 aaKnown RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 FOXL1Q12952 345 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 INO80CQ6PI98 192 aaPredicted RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 ZNF818PQ6ZRF7 136 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 SCD5Q86SK9 330 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 IFI27L1Q96BM0 104 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 YBX2Q9Y2T7 364 aaKnown RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 TRBV24-1A0A075B6N3 115 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 PRSS47A8MTI9 375 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 SPRY3O43610 288 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 A0A1W2PQF6 199 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 SERTM1A2A2V5 107 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 METTL12A8MUP2 240 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 ATXN7O15265 892 aaPredicted RBP5.28□□□□□ -1.56
VCAN-203ENST00000343200 TMEM252Q8N6L7 170 aa5.28□□□□□ -1.56
VCAN-203ENST00000343200 C9JAW5 83 aa5.27□□□□□ -1.57
VCAN-203ENST00000343200 MGST3O14880 152 aa5.27□□□□□ -1.57
VCAN-203ENST00000343200 NPSP0C0P6 89 aa5.27□□□□□ -1.57
VCAN-203ENST00000343200 WFDC8Q8IUA0 241 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms